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Job DescriptionP76092
Confidence99.91%DateThu Jan 5 12:18:46 GMT 2012
Rank120Aligned Residues250
% Identity14%Templatec2ockA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80 ......
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Query Sequence  EHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHLVDELAMPDTAFYAWDARGHGKSSGPRGY. . SPSLAR
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Template Sequence  TSAKVAVNGVQLHYQQTGEGDH. . . AVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFER
Template Known Secondary structure  TT

S...

TT


S
TTT

TTSTT

SS




TT
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   23......30.........40.... .....50.........60.........70.........80.........90.........
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  SVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVLVATWIHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFF
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Template Sequence  DAKDAVDLMKAL. . . . . . KFKKVSLLGWSNGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTR
Template Known Secondary structure  T......T
SST
TTTS

SB

S
GGGS
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   100.........110. ........120.........130.........140.........150.........160.........170...
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  INSYVKGRYLTHDRQRGASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQIDFYQRLR
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Template Sequence  KPLEALYGYDYFARTCEKWVDGIRQFKHLPDGN. . . . . . . . . . ICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK
Template Known Secondary structure 
GGGGSGGGB..........SSTTTGGG

S
TT
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   174.....180.........190.........200...... ...210.........220.........230.........240...
 
   247..250.........260.........270.........280
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Query Sequence  SPLKELHLLPGFYHDTLGEENRALAFEKMQSFIS
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Template Sequence  GS. . RLHLMPEGKHNLHLRF. ADEFNKLAEDFLQ
Template Known Secondary structure  T
..TT

TTT.
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   244. ....250.........260. ........270....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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