Phyre 2 alignment of P76092 with c1mpxB

Job Description P76092
Confidence 99.81% Date Thu Jan 5 12:18:46 GMT 2012

Rank 213 Aligned Residues 304

% Identity 14% Template c1mpxB_

PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: alpha-amino acid ester hydrolase labeled with selenomethionine

Resolution 1.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence	E	N	S	R	I	P	G	E	H	F	F	T	T	S	D	N	T	A	L	F	Y	R	H	W	P	A	L	Q	P	G	A	K	K	V	I	V	L	F	H	R	G	H	E	H	.	.	.	.	.	.	.	.	.	.	.	S	G	R	L	Q	H	L	V	D	E	L	A	M	P	D	T	A	F	Y	A	W	D	A	R	G
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	S	N	D	Y	I	K	R	E	V	X	I	P	X	R	D	G	V	K	L	H	T	V	I	V	L	P	K	G	A	K	N	A	P	I	V	L	T	R	T	P	Y	D	A	S	G	R	T	E	R	L	A	S	P	H	X	K	D	L	L	S	A	G	D	D	V	F	V	E	G	G	Y	I	R	V	F	Q	D	V	R	G
Template Known Secondary structure	T		S											T	T	S											T	T			S									S	S						T		S	S			S						S		G	G	G						T	T									T	T
Template Predicted Secondary structure
Template SS confidence
	42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

	71	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence	H	G	K	S	S	G	P	R	.	.	.	.	.	.	.	.	G	Y	S	P	S	L	A	R	S	V	R	D	V	D	E	F	V	R	F	A	A	S	D	S	Q	V	G	L	E	E	V	V	V	I	A	Q	S	V	G	A	V	L	V	A	T	W	I	H	D	Y	A	P	A	I	R	G	L	V	L	A	S	P	A	F
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	K	Y	G	S	E	G	D	Y	V	X	T	R	P	L	R	G	P	L	N	P	S	E	V	D	H	A	T	D	A	W	D	T	I	D	W	L	V	K	N	V	S	E	S	N	G	K	V	G	X	I	G	S	S	Y	E	G	F	T	V	V	X	A	L	T	N	P	H	P	A	L	K	V	A	V	P	E	S	P	X	I
Template Known Secondary structure	S	T	T			S				T	T				S	B	T	T	B		S	S																			T	T											T											T	S			T	T								S
Template Predicted Secondary structure
Template SS confidence
	122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

	143	.	.									.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																																																															.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.																																																															.	.	.	.	.	.	.
Query Sequence	K	V	K	.	.	.	.	.	.	.	.	L	Y	V	P	L	A	R	P	A	L	A	L	W	H	R	L	R	G	L	F	F	I	N	S	Y	V	K	G	R	Y	L	T	H	D	R	Q	R	G	A	S	F	N	N	D	P	L	I	T	R	A	I	A	V	N	I	L	L	D	L	Y	K	T	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.																																																															.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	G	W	X	G	D	D	W	F	N	Y	G	A	F	R	Q	V	N	F	D	Y	F	T	G	Q	L	S	K	R	G	K	G	A	G	I	A	R	Q	G	H	D	D	Y	S	N	F	L	Q	A	G	S	A	G	D	F	A	K	A	A	G	L	E	Q	L	P	W	W	H	K	L	T	E	H	A	A	Y	D	A	F	W
Template Known Secondary structure		T	T	T	T	S	S	S			T	T			B	G	G	G									S	S	S	S								S	S	S											S								T	T	G	G	G	S									T		S	S
Template Predicted Secondary structure
Template SS confidence
	202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

				208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.													.
Predicted Secondary structure	.	.	.																																					.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.																																					.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	S	E	R	I	I	R	D	A	A	A	I	T	L	P	T	Q	L	L	I	S	G	D	D	Y	V	V	H	R	Q	P	Q	I	D	F	Y	Q	.	.	.	.	R	L	R	S	P	L	K	E	L	H	L	L	P	G	F	Y	H	D	T	L	G	E	E	N	.	.	.	.	.	.	.	.	.	.	.	.	R
Query Conservation	.	.	.																																					.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.																																					.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	Q	E	Q	A	L	D	K	V	X	A	R	T	P	L	K	V	P	T	X	W	L	Q	G	L	W	D	Q	E	D	X	W	G	A	I	H	S	Y	A	A	X	E	P	R	D	K	R	N	T	L	N	Y	L	V	X	G	P	W	R	H	S	Q	V	N	Y	D	G	S	A	L	G	A	L	N	F	E	G	D	T	A	R
Template Known Secondary structure		T	T								T	S				S								T	T		S	S		S	S										G	G	G		T	T	S	S	S							S		S	T	T	G	G	G	S			S			T	T				S	S
Template Predicted Secondary structure
Template SS confidence
	282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

	269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	L	A	F	E	K	M	Q	S	F	I	S	R	L	Y	A	N	K	S	Q	K	F	D	Y	Q	H	E	D	C	T	G	P	S	A	D	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Q	F	R	H	D	V	L	R	P	F	F	D	Q	Y	L	V	D	G	A	P	K	A	D	T	P	P	V	F	I	Y	N	T	G	E	N	H	W
Template Known Secondary structure						T										S	T	T								S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
	362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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