 |
Job Description | P76092 | Confidence | 99.53% | Date | Thu Jan 5 12:18:46 GMT 2012 |
Rank | 386 | Aligned Residues | 112 |
% Identity | 17% | Template | c1dl5A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:protein-l-isoaspartate o-methyltransferase; |
PDBTitle: protein-l-isoaspartate o-methyltransferase
|
Resolution | 1.80 Å |
|
 |
  |   |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | K | Q | A | V | A | D | L | H | A | K | G | L | A | V | R | V | V | D | I | A | A | G | H | G | R | Y | V | L | D | A | L | A | N | E | P | A | V | S | D | I | L | L | R | D | Y | S | E | L | N | V | A | Q | G | Q | E | M | I | A | Q | R | G | M | S | G | R | V | R | F | E | Q | G | D | A | F | N | P | E | E |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|   |
|   |   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   | . |   |
|
|   |   |
|   |
|
|   | . | . | . |   |   |
Template Sequence |   |
S | L | M | A | L | F | M | E | W | V | G | L | D | K | G | M | R | V | L | E | I | G | G | G | T | G | Y | N | A | A | V | M | S | R | V | V | G | E | K | G | L | V | V | S | V | E | Y | S | R | K | I | C | E | I | A | K | R | N | V | E | R | L | G | I | . |
E | N | V | I | F | V | C | G | D | G | . |
. |
. |
Y | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |
| S |  |  |  |  |  | S |
| G | . | . | . | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|  | . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 | . | . | . | . | . | |
|
|
. | . |
  |
  |   |
474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | A | L | T | P | R | P | T | L | A | I | V | S | G | L | Y | E | L | F | P | E | N | E | Q | V | K | N | S | L | A | G | L | A | N | A | I | E | P | G | G | I | L | I | Y |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
Template Sequence |   |
G | V | P | E | F | S | P | Y | D | V | I | F | V | T | V | G | V | D | E | V | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | W | F | T | Q | L | K | E | G | G | R | V | I | V |
Template Known Secondary structure |   |
|
| G | G | G |
|
|  |  |  |  |  |  |
| S | B | B | S |
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|