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Job DescriptionP0ABD1
Confidence90.63%DateThu Jan 5 11:15:12 GMT 2012
Rank7Aligned Residues336
% Identity9%Templatec3giaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:uncharacterized protein mj0609; PDBTitle: crystal structure of apct transporter
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  WGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSAL
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Template Sequence  NLPETFILSGIYALLVAY. SYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKG. . . FAGYFLPL
Template Known Secondary structure  G.TT


TTT
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   40.........50....... ..60.........70.........80.........90.........100....... ..110.....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  TGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNFLQMSL
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Template Sequence  INAPINTFNIAITEIGIVAFFTALNFFGS. KAVGRAEFFIVLVKLLILGLFIFAG. . . . . . . . . . . . . . . . . . . . . LITI
Template Known Secondary structure  TT



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   116...120.........130.........140.... .....150.........160......... 170...
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  FTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVP
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Template Sequence  HPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENP. . KKNVPRAIFISILIVMFVYVGVAISAIGNLPIDE
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GGGTS


SGGGGGTTTGGGBSS..TTS
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   174.....180.........190.........200.........210....... ..220.........230.........240.........250.
 
   325....330.........340.........350.........360.........370.........380.... .....390.........400..
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Query Sequence  QVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGD. . DPDRGLRLFWCVVITLIP
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Template Sequence  LIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALG
Template Known Secondary structure  TGGGTTTSS

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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   403......410.........420.........430.........440.........450..
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Query Sequence  LSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQ
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Template Sequence  VLFALLFN. . . . MEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVI
Template Known Secondary structure  S
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   332....... 340.........350.........360.........370.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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