|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
M | S | V | L | Q | V | L | H | I | P | D | E | R | L | R | K | V | A | K | P | V | E | . |
E | V | N | A | E | I | Q | R | I | V | D | D | M | F | E | T | M | Y | A | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | G | I | G | L | A | A | T | Q | V | D | I | H | Q | R | I | I | V | I | D | V | S | . |
. |
. |
Query Conservation |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |
|   |   |
|   | . |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
|
|   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
Template Sequence |   |
L | T | M | K | D | I | I | R | D | G | H | P | T | L | R | Q | K | A | A | E | L | E | L | P | L | T | K | E | E | K | E | T | L | I | A | M | R | E | F | L | V | N | S | Q | D | E | E | I | A | K | R | Y | G | L | R | S | G | V | G | L | A | A | P | Q | I | N | I | S | K | R | M | I | A | V | L | I | P | D | D | G |
Template Known Secondary structure |   |
|
| G | G | G | S |
|
| T | T |
| G | G | G | G | S |
|
| B |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | T |
|
|
| B | S |  |  |  | G | G | G | G | T |
|
| B | S |  |  |  |  |  |  |
|
|
| S |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | R | D | E | R | L | V | L | I | N | P | E | L | L | E | K | S | G | E | T | G | I | . |
. |
. |
E | E | G | C | L | S | I | P | E | Q | R | A | L | V | P | R | A | E | K | V | K | I | R | A | L | D | R | D | G | K | P | F | E | L | E | A | D | G | L | L | A | I | C | I | Q | H | E | M | D | H | L | V | G | K |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . |   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |
Template Sequence |   |
S | G | K | S | Y | D | Y | M | L | V | N | P | K | I | V | S | H | S | V | Q | E | A | Y | L | P | T | G | E | G | L | S | V | D | D | N | V | A | G | L | V | H | R | H | N | R | I | T | I | K | A | K | D | I | E | G | N | D | I | Q | L | R | L | K | G | Y | P | A | I | V | F | Q | H | E | I | D | H | L | N | G | V |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |
| T | T |
|
|
|
|
|
| S | S |
|
|
| S |
|
|
|  |  | S |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | M | D | Y | L | S | P | L | K | Q |
Query Conservation |   |
|   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |   |   |   |
Template Sequence |   |
M | F | Y | D | H | I | D | K | N | H | P |
Template Known Secondary structure |   |
| G | G | G | G |
|
| S | S | S | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . |
  |