Job Description P0A6K3 Confidence 100.00% Date Thu Jan 5 11:03:20 GMT 2012 Rank 23 Aligned Residues 160 % Identity 28% Template c3l87A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptide deformylase; PDBTitle: the crystal structure of smu.143c from streptococcus mutans ua159 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																								.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	V	L	Q	V	L	H	I	P	D	E	R	L	R	K	V	A	K	P	V	E	.	E	V	N	A	E	I	Q	R	I	V	D	D	.	.	.	.	.	.	.	.	.	.	.	.	M	F	E	T	M	Y	A	E	E	G	I	G	L	A	A	T	Q	V	D	I	H	Q	R	I	I	V	I	D	V	S	E	N	R
Query Conservation																								.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	M	N	D	I	I	R	E	G	H	P	T	L	R	A	V	A	Q	D	V	T	F	P	L	N	E	D	D	I	I	L	G	E	K	M	L	Q	F	L	K	N	S	Q	D	P	V	T	A	E	K	M	E	L	R	G	G	V	G	L	A	A	P	Q	L	D	I	S	K	R	I	I	A	V	L	I	P	N	P	E
Template Known Secondary structure				T	T	S	S			T	T		G	G	G	T	S			B				S	S																					S								T					S				G	G	G	G	T			B	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		68	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																			.	.	.
Query SS confidence				.	.	.	.	.	.	.																			.	.	.
Query Sequence		D	E	.	.	.	.	.	.	.	R	L	V	L	I	N	P	E	L	L	E	K	S	G	E	T	G	I	.	.	.	E	E	G	C	L	S	I	P	E	Q	R	A	L	V	P	R	A	E	K	V	K	I	R	A	L	D	R	D	G	K	P	F	E	L	E	A	D	G	L	L	A	I	C	I	Q	H	E	M	D	H
Query Conservation				.	.	.	.	.	.	.																			.	.	.
Alig confidence				.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		D	P	P	K	E	A	Y	A	L	K	E	V	M	Y	N	P	R	I	I	A	H	S	V	Q	D	A	A	L	A	D	G	E	G	L	S	V	D	R	V	V	E	G	Y	V	I	R	H	S	R	V	T	I	E	Y	Y	D	K	N	S	D	K	K	K	L	K	L	K	G	Y	Q	S	I	V	V	Q	H	E	I	D	H
Template Known Secondary structure					S	S	S																	S	S					T	T								S				S		B				S									T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	K	L	F	M	D	Y	L	S	P	L	K	Q	Q	R	I	R	Q	K	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	G	I	M	F	F	D	R	I	N	E	K	N	P	F	E	I	K	E	G	L	L
Template Known Secondary structure			T	T			G	G	G	G	B		S	S		T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions