Job Description P0A6K3 Confidence 100.00% Date Thu Jan 5 11:03:20 GMT 2012 Rank 19 Aligned Residues 161 % Identity 30% Template c3g6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptide deformylase; PDBTitle: crystal structure of an efpdf complex with met-ala-ser Resolution 2.50 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.													.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																								.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	V	L	Q	V	L	H	I	P	D	E	R	L	R	K	V	A	K	P	V	E	.	E	V	N	A	E	I	Q	R	I	V	D	D	M	F	E	T	M	Y	A	E	.	.	.	.	.	.	.	.	.	.	.	.	E	G	I	G	L	A	A	T	Q	V	D	I	H	Q	R	I	I	V	I	D	V	S	E	N	R
Query Conservation																								.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	M	D	D	I	I	R	E	G	N	P	T	L	R	E	V	A	K	E	V	S	L	P	L	S	E	E	D	I	S	L	G	K	E	M	L	E	F	L	K	N	S	Q	D	P	I	K	A	E	E	L	H	L	R	G	G	V	G	L	A	A	P	Q	L	D	I	S	K	R	I	I	A	V	H	V	P	S	S	L
Template Known Secondary structure				G	G	G	S			T	T		G	G	G	G	S			B				S	S																				T	S							T	T					S				G	G	G	G	T			B	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																						.	.	.									.
Query SS confidence																						.	.	.									.
Query Sequence		D	E	R	L	V	L	I	N	P	E	L	L	E	K	S	G	E	T	G	I	.	.	.	E	E	G	C	L	S	I	P	.	E	Q	R	A	L	V	P	R	A	E	K	V	K	I	R	A	L	D	R	D	G	K	P	F	E	L	E	A	D	G	L	L	A	I	C	I	Q	H	E	M	D	H	L	V	G	K	L	F
Query Conservation																						.	.	.									.
Alig confidence		.	.																			.	.	.									.
Template Conservation		.	.
Template Sequence		.	.	S	T	V	M	Y	N	P	K	I	L	S	H	S	V	Q	D	A	C	L	G	E	G	E	G	C	L	S	V	D	R	E	V	P	G	Y	V	V	R	H	A	K	I	T	V	S	Y	Y	D	M	N	G	E	K	H	K	I	R	L	K	N	Y	E	S	I	V	V	Q	H	E	I	D	H	I	N	G	V	M	F
Template Known Secondary structure		.	.														S	S					T	T					T	T			S				S						S									T	T	S																							T	T			G
Template Predicted Secondary structure		.	.
Template SS confidence
				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	Y	L	S	P	L	K	Q	Q	R	I	R	Q	K	V	E	K	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	H	I	N	D	Q	N	P	F	A	L	K	E	G	V	L	V	I	E
Template Known Secondary structure		G	G	G	S		T	T	S	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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