Job Description P0A6K3 Confidence 8.04% Date Thu Jan 5 11:03:20 GMT 2012 Rank 69 Aligned Residues 69 % Identity 17% Template c2h7fX_ PDB info PDB header:isomerase/dna Chain: X: PDB Molecule:dna topoisomerase 1; PDBTitle: structure of variola topoisomerase covalently bound to dna Resolution 2.70 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.														.
Query SS confidence																																				.	.														.
Query Sequence		G	C	L	S	I	P	E	Q	R	A	L	V	P	R	A	E	K	V	K	I	R	A	L	D	R	D	G	K	P	F	E	L	E	A	.	.	D	G	L	L	A	I	C	I	Q	H	E	M	D	.	H	L	V	G	K	L	F	M	D	Y	L	S	P	L	K	Q	Q	R	I	R	Q	K	V
Query Conservation																																				.	.														.
Alig confidence															.																					.	.														.
Template Conservation															.
Template Sequence		G	L	L	T	L	K	N	K	H	I	E	I	S	.	P	D	K	I	V	I	K	F	V	G	K	D	K	V	S	H	E	F	V	V	H	K	S	N	R	L	Y	K	P	L	L	K	L	T	D	D	S	S	P	E	E	F	L	F	N	K	L	S	E	R	K	V	Y	E	S	I	K	Q	F
Template Known Secondary structure			S	T	T		B	G	G	G					.	S	S									G	G	G									T	T	S	T	T										T	T		T	T	S	B	T	T	T	T											G	G	G
Template Predicted Secondary structure															.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions