Job Description P0A6K3 Confidence 100.00% Date Thu Jan 5 11:03:20 GMT 2012 Rank 20 Aligned Residues 150 % Identity 37% Template c1zy1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:peptide deformylase, mitochondrial; PDBTitle: x-ray structure of peptide deformylase from arabidopsis2 thaliana (atpdf1a) in complex with met-ala-ser Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	Q	V	L	H	I	P	D	E	R	L	R	K	V	A	K	P	V	E	E	V	N	.	.	.	A	E	I	Q	R	I	V	D	D	M	F	E	T	M	Y	A	E	E	G	I	G	L	A	A	T	Q	V	D	I	H	Q	R	I	I	V	I	D	V	S	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	E	I	V	A	S	G	D	P	V	L	H	E	K	A	R	E	V	D	P	G	E	I	G	S	E	R	I	Q	K	I	I	D	D	M	I	K	V	M	R	L	A	P	G	V	G	L	A	A	P	Q	I	G	V	P	L	R	I	I	V	L	E	D	T	K	E	Y	I	S	Y	A	P	K	E	E	I	L	A	Q
Template Known Secondary structure								T	T	S	G	G	G	G	S			B				T	T	G	G	G	S																	T	T		S				G	G	G	G	T			B														T	S								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.																			.
Query SS confidence		.	.	.																			.
Query Sequence		.	.	.	R	D	E	R	L	V	L	I	N	P	E	L	L	E	K	S	G	E	.	T	G	I	E	E	G	C	L	S	I	P	E	Q	R	A	L	V	P	R	A	E	K	V	K	I	R	A	L	D	R	D	G	K	P	F	E	L	E	A	D	G	L	L	A	I	C	I	Q	H	E	M	D	H	L	V	G	K	L
Query Conservation		.	.	.																			.
Alig confidence		.	.	.																			.
Template Conservation
Template Sequence		E	R	R	H	F	D	L	M	V	M	V	N	P	V	L	K	E	R	S	N	K	K	A	L	F	F	E	G	C	L	S	V	D	G	F	R	A	A	V	E	R	Y	L	E	V	V	V	T	G	Y	D	R	Q	G	K	R	I	E	V	N	A	S	G	W	Q	A	R	I	L	Q	H	E	C	D	H	L	D	G	N	L
Template Known Secondary structure		T																	S	S	S										T	T												S									T	T	S																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		143	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	D	Y	L	S	P	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	D	K	M	V	P	R	T	F
Template Known Secondary structure		G	G	G	G	B		T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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