Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6K3
Confidence100.00%DateThu Jan 5 11:03:20 GMT 2012
Rank20Aligned Residues150
% Identity37%Templatec1zy1B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:peptide deformylase, mitochondrial; PDBTitle: x-ray structure of peptide deformylase from arabidopsis2 thaliana (atpdf1a) in complex with met-ala-ser
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40.........50.........60......
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Query Sequence  VLQVLHIPDERLRKVAKPVEEVN. . . AEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSEN. . . . . . . . . . . . .
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Template Sequence  LPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQ
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TTSGGGGS

B


TTGGGSTT
SGGGGT

B

TS
T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   67..70.........80.... .....90.........100.........110.........120.........130.........140..
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Query Sequence  . . . RDERLVLINPELLEKSGE. TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKL
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Template Sequence  ERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNL
Template Known Secondary structure  T


SSS
TTS
TTS
TTT

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   143......150..
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Query Sequence  FMDYLSPLKQ
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Template Sequence  YVDKMVPRTF
Template Known Secondary structure  GGGGB
TT

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   163......170..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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