Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6K3
Confidence100.00%DateThu Jan 5 11:03:20 GMT 2012
Rank10Aligned Residues151
% Identity42%Templatec1ws1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:peptide deformylase 1; PDBTitle: structure analysis of peptide deformylase from bacillus2 cereus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLE
Query Conservation 


  
   


 

  
  
         

  
  

    









   

 

          




 
  
Alig confidence 


































































.











Template Conservation 


  
    
  

     
      
   
  
  

    









   

 

      .   
 


 
  
Template Sequence  MAVLEIIKHPNEVLETPCERVINFDKKLVKLLKDMHETMLIADGVGLAAPQVGVSLQVAVVDVDDDT. GKIELINPSILE
Template Known Secondary structure 







SS
GGGGS

B





TT
SGGGGT

BS


TTT.

Template Predicted Secondary structure 


































.



Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60....... ..70.........
 
   81........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 
























Query SS confidence 







































































Query Sequence  KSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQ
Query Conservation   
      




 
     
 
   
 
 
 
  
        
  

  






 
 
  


     
Alig confidence 







































































Template Conservation   
      




 

    
 
   
 
   
  
        
  

  






 
 
  


     
Template Sequence  KRGEQVGPEGCLSFPGLYGEVERADYIKVRAQNRRGKVFLLEAEGFLARAIQHEIDHLHGVLFTSKVTRYYE
Template Known Secondary structure 
TTSTT

TT


TT

GGGG

Template Predicted Secondary structure 




























Template SS confidence 







































































   80.........90.........100.........110.........120.........130.........140.........150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions