Return to main results Retrieve Phyre Job Id

Job DescriptionP32055
Confidence99.89%DateThu Jan 5 11:49:02 GMT 2012
Rank68Aligned Residues265
% Identity15%Templated1xgka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........ .40.........50.........60....
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Query Sequence  SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE. . . . . . . . . . . . . . . . . LNLLDSRAVHDFFASERIDQVYLAAA
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Template Sequence  QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE. GAHLAFINTT
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STTSTT

S
S
STSTTS

TT
T.T
S


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   4.....10.........20.........30.........40.........50.........60.........70.. .......80..
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGI
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Template Sequence  SQAGD. . . . . . . . . . . . . EIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPM. . . . . . . . . . . . . . . . . . WAPK
Template Known Secondary structure  STTS
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S


GGGTSS



TT..................T
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   83.... ..90.........100.........110.........120....... ..130.
 
   145....150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  KLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHV
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Template Sequence  FTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQME. . . . . . . . . LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ
Template Known Secondary structure  TSSS

GGG
BSSS
SS
B.........
TTS
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TTS

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   132.......140.........150.........160........ .170.........180.........190.........200..
 
   225....230.........240.........250.........260.........270.......
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Query Sequence  MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKP. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IFKDGPQKWNGH. . . . . . RIALTFETLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPY
Template Known Secondary structure 
TT
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S
TS

SS



S


TTS


S
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   203......210.... .....220.........230.........240.........250.........260.........270......
 
   278.280.........290 .........300.........310....
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Query Sequence  . . . . . . DGTPRKLLDVTRL. HQLGWYHEISLEAGLASTYQWFLE
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Template Sequence  FPLPEFSPGGVISQRVTDEARKLWSGWR. DMEEYAREVFPIEEE
Template Known Secondary structure  S
SGGG

TT




TT
TT

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   277..280.........290.........300.... .....310.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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