Job Description P32055 Confidence 95.96% Date Thu Jan 5 11:49:02 GMT 2012 Rank 485 Aligned Residues 102 % Identity 15% Template c3tl2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of bacillus anthracis str. ames malate dehydrogenase2 in closed conformation. Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.																	.	.	.	.	.	.	60	.
Predicted Secondary structure																														.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	.	V	E	L	V	L	R	T	R	D	E	L	N	L	L	.	.	D	S	R	A	V	H	D	F	F	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	I	D	Q	V	Y	L
Query Conservation																														.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																	.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		I	K	R	K	K	V	S	V	I	G	A	.	G	F	T	G	A	T	T	A	F	L	L	A	Q	K	E	L	A	D	V	V	L	V	D	I	P	Q	L	E	N	P	T	K	G	K	A	L	D	M	L	E	A	S	P	V	Q	G	F	D	A	N	I	I	G	T	S	D	Y	A	D	T	A	D	S	D	V	V	V	I
Template Known Secondary structure													.	S													T	T										G	G	G																			T									S		G	G	G	G	T	T		S
Template Predicted Secondary structure													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	K	V	G	G	I	V	A	N	N	T	Y	P	A	D	F	I	Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	G	I	A	R	K	P	G	M	S	R	D	D	L	V	A	T	N	S	K	I	M	K	S	I	T	R	D	I	A	K	H	S	P	N	A	I	I	V	V	L
Template Known Secondary structure				S					T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions