Job Description P32055 Confidence 100.00% Date Thu Jan 5 11:49:02 GMT 2012 Rank 47 Aligned Residues 274 % Identity 17% Template c3sc6F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:dtdp-4-dehydrorhamnose reductase; PDBTitle: 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose2 reductase (rfbd) from bacillus anthracis str. ames in complex with3 nadp Resolution 2.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	E	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	R	I	D	Q	V	Y	L	A	A	A	K	V	G	G	I	V	A	N	N	T	Y	P	A	D	F	I
Query Conservation
Alig confidence				.																																			.																															.	.
Template Conservation				.																																			.																															.	.
Template Sequence		M	K	.	E	R	V	I	I	T	G	A	N	G	Q	L	G	K	Q	L	Q	E	E	L	N	P	E	E	Y	D	I	Y	P	F	D	K	K	L	.	L	D	I	T	N	I	S	Q	V	Q	Q	V	V	Q	E	I	R	P	H	I	I	I	H	C	A	A	Y	T	K	V	.	.	D	Q	A	E	K	E	R	D	L	A
Template Known Secondary structure				.							T	T	T	S										S		T	T	T								T	T	T	.			T	T															S											T	.	.	T	G	G	G	T
Template Predicted Secondary structure				.																																			.																															.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T	L	E	P	T	N	E	P	Y	A	I	A	K	I	A	G	I	K	L	C	E	S	Y	N	R	Q	Y	G	R	D	Y	R	S
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	I	N	A	I	G	A	R	N	V	A	V	A	S	Q	L	V	G	A	K	L	V	Y	I	S	T	D	Y	V	F	Q	G	D	R	P	E	G	Y	D	E	F	H	N	P	A	P	I	.	.	.	.	.	.	.	.	.	N	I	Y	G	A	S	K	Y	A	G	E	Q	F	V	K	E	L	H	N	K	Y	F	I
Template Known Secondary structure						T														T									S	T	T	S					S	S		B		T	T	S					S	.	.	.	.	.	.	.	.	.	S																		S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.										.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T	P	M	R	E	F	L	H	V	D	D	M	A	A	A	S	I	H	V	M	E	L	A	H	E	V	W	L	E	N	T	Q	P	M	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		V	R	T	S	W	L	Y	G	K	Y	G	N	N	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	M	I	R	L	G	K	E	R	E	E	I	S	V	V	A	D	Q	I	G	S	P	T	Y	V	A	D	L	N	V	M	I	N	K	L	I	H	T	S	L	Y	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S				S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.											S							S																			T	T	T					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.														.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		S	H	I	N	V	G	T	G	V	D	C	T	I	R	E	L	A	Q	T	I	A	K	V	V	G	Y	K	G	R	V	V	F	D	A	S	K	P	.	.	.	.	.	D	G	T	P	R	K	L	L	D	V	T	R	L	H	Q	L	G	W	Y	H	E	I	S	L	E	A	G	L	A	S	T	Y	Q
Query Conservation																																							.	.	.	.	.
Alig confidence		.																																					.	.	.	.	.
Template Conservation		.
Template Sequence		.	T	Y	H	V	S	N	T	G	S	C	S	W	F	E	F	A	K	K	I	F	S	Y	A	N	M	K	V	N	V	L	P	V	S	T	E	E	F	G	A	A	A	A	R	P	K	Y	S	I	F	Q	H	N	M	L	R	L	N	G	F	L	Q	M	P	S	W	E	E	G	L	E	R	F	F	I
Template Known Secondary structure		.							B	S															T	T														T		S	S				S				B								T	T						B
Template Predicted Secondary structure		.
Template SS confidence
			206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions