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Job DescriptionP32055
Confidence98.79%DateThu Jan 5 11:49:02 GMT 2012
Rank185Aligned Residues158
% Identity15%Templatec3sc4A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short chain dehydrogenase (a0qtm2 homolog); PDBTitle: crystal structure of a short chain dehydrogenase (a0qtm2 homolog)2 mycobacterium thermoresistibile
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30........ .40.........50...
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Query Sequence  MSKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE. . . . . . . . . . . . . . . . . . . . . . . . . . . LNLLDSRAVHDFFAS
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Template Sequence  LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK
Template Known Secondary structure 
TT
S
SSTTT
S

S

SSS


TS

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   54.....60.........70.........80.........90.........100.........110.........120........
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Query Sequence  . . . . . ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT
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Template Sequence  TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR. . . . . . . . LEP
Template Known Secondary structure  S

S








TTTS
GGGTTTSSS






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   83......90.........100.........110.........120.........130.........140.........150. ...
 
   129130.........140.........150.........160......
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Query Sequence  LEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL
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Template Sequence  KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWP
Template Known Secondary structure  GGS
STGGGT

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   155....160.........170.........180.........190..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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