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Job DescriptionP32055
Confidence98.72%DateThu Jan 5 11:49:02 GMT 2012
Rank215Aligned Residues197
% Identity15%Templatec3osuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of the 3-oxoacyl-acyl carrier protein reductase,2 fabg, from staphylococcus aureus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30....... ..40.........50.... ..
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Query Sequence  KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD. . . . . . . . . . . . . . . . . . . . . ELNLLDSRAVHDFFASE. . . . . RI
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Template Sequence  TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGSL
Template Known Secondary structure  S
TT
SSTT
SS
TTS


TT
S

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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   57..60.........70.........80.........90.........100.........110.........120.........130......
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Query Sequence  DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY
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Template Sequence  DVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVV. . . . . . . . . GAVGNPGQANY
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TTT

TT


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TT
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   84.....90.........100.........110.........120.........130.........140... ......150....
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDD
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Template Sequence  VATKAGVIGLTKSAARELASRGITV. . . NAVAPGFIVSDXTDALSDELKEQXLTQIPLA. . . . . . . . . . . . . . RFGQDTD
Template Known Secondary structure  GGGT...
SBGGG

S
S
TT
TT
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B
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   155....160.........170......... 180.........190.........200.........210 .......
 
   217..220.....
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Query Sequence  MAAASIHVM
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Template Sequence  IANTVAFLA
Template Known Secondary structure  T
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   218.220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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