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Job DescriptionP32055
Confidence98.70%DateThu Jan 5 11:49:02 GMT 2012
Rank221Aligned Residues201
% Identity12%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE. . . . . . . . . . . . . . . . . LNLLDSRAVHDFFASE. . . . . RIDQ
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Template Sequence  LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI
Template Known Secondary structure  TTT
TTTTSTT


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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   5960.........70.........80.........90.........100.........110.........120.........130........
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Query Sequence  VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI
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Template Sequence  LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNT. . . . . . . . FFAGTPNMAAYVA
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GGG

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   85....90.........100.........110.........120.........130.........140... ......150......
 
   139140.........150.........160.........170.........180.........190.........200.........210........
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Query Sequence  AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
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Template Sequence  AKGGVIGFTRALATELGKYNITANAVTPGL. . . . . . . . . . . . . . . . IESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIA
Template Known Secondary structure  GGGT
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TSGGGGGSSS
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   157..160.........170.........180...... ...190.........200.........210.........220
 
   219220.....
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Query Sequence  AASIHVM
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Template Sequence  DVVSFLA
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   221......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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