Job Description P32055 Confidence 97.00% Date Thu Jan 5 11:49:02 GMT 2012 Rank 347 Aligned Residues 53 % Identity 17% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	E	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	R	I	D	Q	V	Y	L	A	A	A
Query Conservation
Alig confidence				.	.	.							.																								.	.	.	.	.	.	.
Template Conservation				.	.	.							.																								.	.	.	.	.	.	.
Template Sequence		M	K	.	.	.	V	I	I	I	G	G	.	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	.	.	.	.	.	.	.	D	R	E	L	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S
Template Known Secondary structure				.	.	.							.														T	T								S	.	.	.	.	.	.	.												S	S	S					S		T	T
Template Predicted Secondary structure				.	.	.							.																								.	.	.	.	.	.	.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions