Job Description P32055 Confidence 98.80% Date Thu Jan 5 11:49:02 GMT 2012 Rank 175 Aligned Residues 195 % Identity 17% Template c3kvoB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2) Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																												.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	C	T	V	F	I	T	G	A	S	R	G	I	G	K	A	I	A	L	K	A	A	K	D	G	A	N	I	V	I	A	A	K	T	A	Q	P	H	P	K	L	L	G	T	I	Y	T	A	A	E	E	I	E	A	V	G	G	K	A	L	P	C	I	V	D	V	R	D	E	Q	Q	I	S	A	A	V	E	K
Template Known Secondary structure		T	T	T							T		S	S												T	T	T								S		S	S			S	S	S															T										T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		54						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		E	.	.	.	.	.	R	I	D	Q	V	Y	L	A	A	A	K	V	G	G	I	V	A	N	N	T	Y	P	A	D	F	I	Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																																																																	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		A	I	K	K	F	G	G	I	D	I	L	V	N	N	A	S	A	I	S	L	T	N	T	L	D	T	P	T	K	R	L	D	L	M	M	N	V	N	T	R	G	T	Y	L	A	S	K	A	C	I	P	Y	L	K	K	S	K	V	A	H	I	L	N	I	S	P	P	L	N	L	.	.	.	.	.	.	.	N	P	V
Template Known Secondary structure							S																	T	T	T	S												T																T	T		S	S													.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		L	E	P	T	N	E	P	Y	A	I	A	K	I	A	G	I	K	L	C	E	S	Y	N	R	Q	.	.	Y	G	R	D	Y	R	S	V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T
Query Conservation																											.	.
Alig confidence																											.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	F	K	Q	H	C	A	Y	T	I	A	K	Y	G	M	S	M	Y	V	L	G	M	A	E	E	F	K	G	E	I	A	V	N	A	L	W	P	K	T	A	I	H	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	D	M	L	G	G	P	G
Template Known Secondary structure					S	S																					T	T	T	T									S	B		B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																												.	.	.	.	.	210	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	R	E	F	L	H	V	D	D	M	A	A	A	S	I	H	V	M	E	L	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	S	Q	C	R	K	V	D	I	I	A	D	A	A	Y	S	I	F	Q	K	P	K
Template Known Secondary structure		G	G	G	G		B														T	S		T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions