Job Description P32055 Confidence 99.96% Date Thu Jan 5 11:49:02 GMT 2012 Rank 56 Aligned Residues 262 % Identity 16% Template c3gpiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus Resolution 1.44 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.											.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	E	.	.	.	.	.	.	.	.	.	.	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	R	I	D	Q	V	Y	L	A	A	A	K	V	G	G	I	V	A
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence												.																											.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation												.																																																			.	.
Template Sequence		S	L	S	K	I	L	I	A	G	C	.	G	D	L	G	L	E	L	A	R	R	L	T	A	Q	G	H	E	V	T	G	L	R	R	S	A	Q	P	M	P	A	G	V	Q	T	L	I	A	D	V	T	R	P	D	T	L	A	S	I	V	H	.	.	L	R	P	E	I	L	V	Y	C	V	A	A	S	E	Y	S	L
Template Known Secondary structure												.	S													T	T									T	T	S				T	T								T	T		G	G	G		T	T	G	G	G	.	.	G			S
Template Predicted Secondary structure												.																																																			.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	T	Y	P	A	D	F	I	Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T	L	E	P	T	N	E	P	Y	A	I	A	K	I	A	G	I	K	L	C	E	S	Y	N
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.																							.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.																							.	.	.	.
Template Sequence		S	Y	.	.	.	.	.	.	.	.	.	.	V	E	G	L	R	N	T	L	S	A	L	E	G	A	P	L	Q	H	V	F	F	V	S	S	T	G	V	Y	G	Q	E	V	E	E	W	L	D	.	.	.	.	.	E	D	T	P	P	I	A	K	D	F	S	G	K	R	M	L	E	A	E	A	L	L	.	.	.	.
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.	.											T	T	T	S											G	G	G						S	S				.	.	.	.	.	T	T	S						S													G	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.																							.	.	.	.
Template SS confidence
		82	.											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Y	G	R	D	Y	R	S	V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T	P	M	R	E	F	L	H	V	D	D	M	A	A	A	S	I	H	V	M	E	L	A	H	E	V
Query Conservation
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	A	A	Y	S	S	T	I	L	R	F	S	G	I	Y	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	R	M	I	R	Q	A	Q	T	P	E	Q	W	P	A	R	N	A	W	T	N	R	I	H	R	D	D	G	A	A	F	I	A	Y	L	I	Q	Q	R	S	H	A
Template Known Secondary structure		.	.	G	G	S	S											B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B							T	T		G	G	G	S		S	S	B																							T	T	S
Template Predicted Secondary structure		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		W	L	E	N	T	Q	P	M	L	S	H	I	N	V	G	T	G	V	D	C	T	I	R	E	L	A	Q	T	I	A	K	V	V	G	Y	K	G	R	V	V	F	D	A	S	K	P	D	G	T	P	R	K	L	L	D	V	T	R	L	H	Q	L	G	W	Y	H	E	I	.	S	L	E	A	G	L	A	S	T	Y	Q
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.																																											.	.	.																		.
Template Conservation		.	.	.	.	.	.																																											.	.	.
Template Sequence		.	.	.	.	.	.	V	P	E	R	L	Y	I	V	T	D	N	Q	P	L	P	V	H	D	L	L	R	W	L	A	D	R	Q	G	I	A	Y	P	A	G	A	T	P	P	V	Q	G	N	.	.	.	K	K	L	S	N	A	R	L	L	A	S	G	Y	Q	L	I	Y	P	D	Y	V	S	G	Y	G	A	L	L	A
Template Known Secondary structure		.	.	.	.	.	.				S							S																T	T						S					B		S	S	.	.	.											T	T				S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.																																											.	.	.
Template SS confidence
								203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		311	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	R	E
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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