Job Description P32055 Confidence 99.92% Date Thu Jan 5 11:49:02 GMT 2012 Rank 62 Aligned Residues 250 % Identity 16% Template c3e48B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of a nucleoside-diphosphate-sugar epimerase2 (sav0421) from staphylococcus aureus, northeast structural genomics3 consortium target zr319 Resolution 1.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	.	D	V	E	L	V	L	R	T	R	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	R	I	D	Q	V	Y	L	A	A	A	K	V	G	G
Query Conservation																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																																																		.	.
Template Sequence		X	N	I	X	L	T	G	A	T	G	H	L	G	T	H	I	T	N	Q	A	I	A	N	H	I	D	H	F	H	I	G	V	R	N	V	E	K	V	P	D	D	W	R	G	K	V	S	V	R	Q	L	D	Y	F	N	Q	E	S	X	V	E	A	F	K	.	.	G	X	D	T	V	V	F	I	P	S	I	I	H	P
Template Known Secondary structure								T	T	T	S													T	T		S	S						S		G	G	G	S		G	G	G	B	T	T	B							T	T										T	.	.	T		S											S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	N	N	T	Y	P	A	D	F	I	Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T	L	E	P	T	N	E	P	Y	A	I	A	K	I	A	G	I	K	L	C	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	F	K	R	I	P	E	V	E	N	L	V	Y	A	A	K	Q	S	G	V	A	H	I	I	F	I	G	Y	Y	A	D	Q	H	N	N	P	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	S	P	Y	F	G	Y	A	S
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.				T														T										S			S	T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																							.	.	.	120	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	N	R	Q	Y	G	R	D	Y	R	S	V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T	P	M	R	E	F	L	H	V	D	D	M	A	A	A	S	I	H	V	M	E	L	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	S	T	S	G	I	D	Y	T	Y	V	R	X	A	X	Y	X	D	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	Y	L	P	E	L	X	N	X	H	K	L	I	Y	P	A	G	D	G	R	I	N	Y	I	T	R	N	D	I	A	R	G	V	I	A	I	I	K	N	P
Template Known Secondary structure																				S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T							T	T																						G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																						.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	V	W	L	E	N	T	Q	P	M	L	S	H	I	N	V	G	T	G	V	D	C	T	I	R	E	L	A	Q	T	I	A	K	V	V	G	Y	K	G	R	V	V	F	D	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	D	G	T	P	R	K	L	L	D	V
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.
Template Sequence		D	T	W	G	K	R	Y	L	.	.	.	.	.	.	.	.	.	L	S	G	Y	S	Y	D	X	K	E	L	A	A	I	L	S	E	A	S	G	T	E	I	K	Y	E	P	V	S	L	E	T	F	A	E	X	Y	D	E	P	K	G	F	G	A	L	L	A	S	X	Y	H	A	G	A	R	G	L	L	D	Q	E	S
Template Known Secondary structure		G	G	T	T	S				.	.	.	.	.	.	.	.	.																				S	S															T	T			S	T	T														T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		288	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		T	R	L	H	Q	.	L	G	W	Y	H	E	I	S	L	E	A	G	L	A	S	T	Y	Q	W	F	L	E	N
Query Conservation							.
Alig confidence							.							.
Template Conservation														.
Template Sequence		N	D	F	K	Q	L	V	N	D	Q	P	Q	.	T	L	Q	S	F	L	Q	E	N	I	L	E	H	H	H	H
Template Known Secondary structure		S							S	S				.							T	T	S					S	S
Template Predicted Secondary structure														.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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