Job Description P32055 Confidence 99.93% Date Thu Jan 5 11:49:02 GMT 2012 Rank 61 Aligned Residues 209 % Identity 21% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	E	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	R	I	D	Q	V	Y	L	A	A	A	K	V	G	G	I	V	A	N	N	T	Y	P	A	D	F	I
Query Conservation
Alig confidence				.	.	.																															.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																															.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	.	.	.	I	V	I	T	G	A	K	G	F	V	G	K	N	L	K	A	D	L	T	S	T	T	D	H	H	I	F	E	V	H	.	.	.	.	R	Q	T	K	E	E	E	L	E	S	A	L	L	.	.	K	A	D	F	I	V	H	L	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S
Template Known Secondary structure				.	.	.					T	T	T	S																							.	.	.	.	T	T												.	.			S									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.																															.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.														.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T	L	E	P	T	N	E	P	Y	A	I	A	K	I	A	G	I	K	L	C	E	S	Y	N	R	Q	Y	G	R	D	Y	R	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	N	V	S	Y	L	D	H	V	L	D	I	L	T	R	N	T	K	K	P	A	I	L	L	S	S	S	I	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	D	N	P	Y	G	E	S	K	L	Q	G	E	Q	L	L	R	E	Y	A	E	E	Y	G	N	T	V	Y	I
Template Known Secondary structure		S	S													T	T		S	S										G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T	P	M	R	E	F	L	H	V	D	D	M	A	A	A	S	I	H	V	M	E	L	A	H	E	V	W	L	E	N	T	Q	P	M	L
Query Conservation
Alig confidence																.	.															.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																.	.															.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		Y	R	W	P	N	L	F	G	K	W	C	K	P	N	.	.	Y	N	S	V	I	A	T	F	C	Y	K	I	A	R	.	.	.	.	.	.	N	E	E	I	Q	V	N	D	R	N	V	E	L	T	L	N	Y	V	D	D	I	V	A	E	I	K	R	A	I	E	G	T	P	T	.	.	.	.	.	.	.	I	E	N
Template Known Secondary structure										T	T			T	T	.	.	T	T											T	T	.	.	.	.	.	.	T						S		T	T																			T	T	T				.	.	.	.	.	.	.			T
Template Predicted Secondary structure																.	.															.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	I	N	V	G	T	G	V	D	C	T	I	R	E	L	A	Q	T	I	A	K	V	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	P	T	V	P	N	V	F	K	V	T	L	G	E	I	V	D	L	L	Y	K	F	K	Q
Template Known Secondary structure		T					S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions