Job Description P32055 Confidence 99.95% Date Thu Jan 5 11:49:02 GMT 2012 Rank 58 Aligned Residues 261 % Identity 18% Template c2ggsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:273aa long hypothetical dtdp-4-dehydrorhamnose PDBTitle: crystal structure of hypothetical dtdp-4-dehydrorhamnose2 reductase from sulfolobus tokodaii Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	.	.	.	.	.	E	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	R	I	D	Q	V	Y	L	A	A	A	K	V	G	G	I	V	A	N	N	T	Y
Query Conservation																																							.	.	.	.	.
Alig confidence				.	.	.																																	.	.	.	.	.																												.
Template Conservation				.	.	.																																																																	.
Template Sequence		M	R	.	.	.	T	L	I	T	G	A	S	G	Q	L	G	I	E	L	S	R	L	L	S	E	R	H	E	V	I	K	V	Y	N	S	S	E	I	Q	G	G	Y	K	L	D	L	T	D	F	P	R	L	E	D	F	I	I	K	K	R	P	D	V	I	I	N	A	A	A	.	M	T	D	V	D	K	C	E	I	E
Template Known Secondary structure				.	.	.					S	T	T	S											T	T	T	S							S	S	S			S	S	B					T	T															S								.
Template Predicted Secondary structure				.	.	.																																																																	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	F	I	Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T	L	E	P	T	N	E	P	Y	A	I	A	K	I	A	G	I	K	L	C	E	S	Y	N	R	Q	Y	G
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		K	E	K	A	Y	K	I	N	A	E	A	V	R	H	I	V	R	A	G	K	V	I	D	S	Y	I	V	H	I	S	T	D	Y	V	F	D	G	E	K	G	N	Y	K	.	.	.	.	.	.	.	E	E	D	I	P	N	P	I	N	Y	Y	G	L	S	K	L	L	G	E	T	F	A	.	.	.	.	.	.	L	Q
Template Known Secondary structure										T													T	T									G	G	G	S		S	S	S		S	B		.	.	.	.	.	.	.	T	T	S					S	S														.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Y	R	S	V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T	P	M	R	E	F	L	H	V	D	D	M	A	A	A	S	I	H	V	M	E	L	A	H	E	V	W	L	E	N
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Sequence		D	D	S	L	I	I	R	T	S	G	I	F	R	N	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	I	Y	V	Y	K	T	L	K	E	G	K	T	V	F	A	F	K	G	Y	Y	S	P	I	S	A	R	K	L	A	S	A	I	L	E	L	L	E	L	R	K	T	G	.	.	.	.
Template Known Secondary structure		T	T											S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T							S																					T	T				.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.										.
Query SS confidence																																																		.	.	.	.										.
Query Sequence		T	Q	P	M	L	S	H	I	N	V	G	T	G	V	D	C	T	I	R	E	L	A	Q	T	I	A	K	V	V	G	Y	K	G	R	V	V	F	D	A	S	K	P	D	G	T	P	R	K	.	.	.	.	L	L	D	V	T	R	L	H	Q	.	L	G	W	Y	H	E	I	S	L	E	A	G	L
Query Conservation																																																		.	.	.	.										.
Alig confidence		.	.	.	.	.	.	.																																										.	.	.	.										.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	I	I	H	V	A	G	E	R	I	S	R	F	E	L	A	L	K	I	K	E	K	F	N	L	P	G	E	V	K	E	V	D	E	V	R	G	W	I	A	K	R	P	Y	D	S	S	L	D	S	S	R	A	R	K	I	L	S	T	D	F	Y	T	L	D	L	D	G	M
Template Known Secondary structure		.	.	.	.	.	.	.																																S	S		T	T			S				S	B			B											S			S	S			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions