Job Description P32055 Confidence 98.83% Date Thu Jan 5 11:49:02 GMT 2012 Rank 165 Aligned Residues 198 % Identity 14% Template c2b4qB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:rhamnolipids biosynthesis 3-oxoacyl-[acyl- PDBTitle: pseudomonas aeruginosa rhlg/nadp active-site complex Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		M	S	K	Q	R	V	F	I	A	G	H	R	G	M	V	G	S	A	I	R	R	Q	L	E	Q	R	G	D	V	E	L	V	L	R	T	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	N	L	L	D	S	R	A	V	H	D	F	F	A	S	E	.	.	.	.	.	R	I
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	R	I	A	L	V	T	G	G	S	R	G	I	G	Q	M	I	A	Q	G	L	L	E	A	G	A	R	V	F	I	C	A	R	D	A	E	A	C	A	D	T	A	T	R	L	S	A	Y	G	D	C	Q	A	I	P	A	D	L	S	S	E	A	G	A	R	R	L	A	Q	A	L	G	E	L	S	A	R	L
Template Known Secondary structure			T	T							T	T	T	S														T								S													T	T	T	S										S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	V	Y	L	A	A	A	K	V	G	G	I	V	A	N	N	T	Y	P	A	D	F	I	Y	Q	N	M	M	I	E	S	N	I	I	H	A	A	H	Q	N	D	V	N	K	L	L	F	L	G	S	S	C	I	Y	P	K	L	A	K	Q	P	M	A	E	S	E	L	L	Q	G	T	L	E	P	T	N	E	P	Y
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	L	V	N	N	A	G	T	S	P	V	S	G	W	E	K	V	M	Q	L	N	V	T	S	V	F	S	C	I	Q	Q	L	L	P	L	L	R	R	S	A	S	A	E	N	P	A	R	V	I	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	G	I	S	A	M	G	E	Q	A	Y	A	Y
Template Known Secondary structure		S											G	G	G									T																				S	S	S									.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T		S				S		T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	K	I	A	G	I	K	L	C	E	S	Y	N	R	Q	Y	G	R	D	Y	R	S	V	M	P	T	N	L	Y	G	P	H	D	N	F	H	P	S	N	S	H	V	I	P	A	L	L	R	R	F	H	E	A	T	A	Q	N	A	P	D	V	V	V	W	G	S	G	T	P	M	R	E	F	L	H	V	D	D
Query Conservation
Alig confidence																																.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	S	K	A	A	L	H	Q	L	S	R	M	L	A	K	E	L	V	G	E	H	I	N	V	N	V	I	A	P	.	G	R	F	P	S	R	M	T	R	H	I	A	N	D	P	Q	A	L	E	A	D	S	A	S	I	P	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	G	R	P	E	E
Template Known Secondary structure																				G	G	G	T									.		S				G	G	G															T	T	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220															.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	A	S	I	H	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	A	L	A	I	S	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions