Return to main results Retrieve Phyre Job Id

Job DescriptionP32055
Confidence95.96%DateThu Jan 5 11:49:02 GMT 2012
Rank486Aligned Residues94
% Identity19%Templatec1ur5C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:malate dehydrogenase; PDBTitle: stabilization of a tetrameric malate dehydrogenase by2 introduction of a disulfide bridge at the dimer/dimer3 interface
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20........ .30.........40.........50... ......60.....
Predicted Secondary structure 








.








................







Query SS confidence 

























.
























. . . . . . . . . . . . . . . .











Query Sequence  KQRVFIAGHRGMVGSAIRRQLEQRGD. VELVLRTRDELNLLDSRAVHDFFAS. . . . . . . . . . . . . . . . ERIDQVYLAAAK
Query Conservation   












  

  

  
 . 
    
    

 
          ................   
 


 

 
Alig confidence 








.















.
























................










.
Template Conservation    

 



.
 

   
  
    
 

 
 

      
   

            
        
  





 

.
Template Sequence  RKKISIIGA. GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSG.
Template Known Secondary structure 



.STT
S
SSTTTTT



S
GGGGTT
S


.
Template Predicted Secondary structure 



.





















.
Template SS confidence 















































































   2.......10 .........20.........30.........40.........50.........60.........70.........
 
   66...70.........80.........90.........100.......
Predicted Secondary structure 

















Query SS confidence 









































Query Sequence  VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS
Query Conservation                                          

Alig confidence  .........
































Template Conservation  ......... 
      
  
       
    
   


 
Template Sequence  . . . . . . . . . AREDLIKVNADITRACISQAAPLSPNAVIIMVN
Template Known Secondary structure  .........

GGG
TT


Template Predicted Secondary structure  .........





Template SS confidence 









































   80.........90.........100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions