Return to main results Retrieve Phyre Job Id

Job DescriptionP32055
Confidence97.73%DateThu Jan 5 11:49:02 GMT 2012
Rank307Aligned Residues97
% Identity18%Templatec1hygA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-lactate/malate dehydrogenase; PDBTitle: crystal structure of mj0490 gene product, the family of2 lactate/malate dehydrogenase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20........ .30.........40.........50... ......60
Predicted Secondary structure 






..








......................



Query SS confidence 























. .
























. . . . . . . . . . . . . . . . . . . . . .






Query Sequence  RVFIAGHRGMVGSAIRRQLEQRGD. . VELVLRTRDELNLLDSRAVHDFFAS. . . . . . . . . . . . . . . . . . . . . . ERIDQVY
Query Conservation 











  

  

  
 .. 
    
    

 
          ......................   
 

Alig confidence 























..








..













......................






Template Conservation 

 



 
 

   
  
       

 
 
   ..          

            
         

  




Template Sequence  KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH. . SINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVI
Template Known Secondary structure  TTTSSTT


GG..GTTS



TT
GGGGTT
S
Template Predicted Secondary structure 











..















Template SS confidence 















































































   2.......10.........20.........30...... ...40.........50.........60.........70.........
 
   61........70.........80.........90.........100......
Predicted Secondary structure 





















Query SS confidence 













































Query Sequence  LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLG
Query Conservation 
 

                                         
Alig confidence 






...



































Template Conservation 



   ...     
  
   
  
       
       




Template Sequence  ITSGVPR. . . KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVIT
Template Known Secondary structure 





...
SS





S
Template Predicted Secondary structure 





...









Template SS confidence 













































   80...... ...90.........100.........110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions