Return to main results Retrieve Phyre Job Id

Job DescriptionP42626
Confidence16.75%DateThu Jan 5 12:01:57 GMT 2012
Rank13Aligned Residues45
% Identity18%Templated1efaa1
SCOP infolambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains GalR/LacI-like bacterial regulator
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270.........280... ......290.........300..
Predicted Secondary structure 

















..



Query SS confidence 

























. .


















Query Sequence  ARMGGATLPAMSNSGSGNQGITATMP. . VVVVAEHFGADDERLARAL
Query Conservation 


 
  




  











..
   
     
 
 
 


Alig confidence 

























..


















Template Conservation 
   


  



 

    

  

 

   
  


 

  
  
Template Sequence  AEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQL
Template Known Secondary structure  TTTS
TT
SS

TT



Template Predicted Secondary structure 














Template SS confidence 














































   10.........20.........30.........40.........50......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions