Job Description P42626 Confidence 15.00% Date Thu Jan 5 12:01:57 GMT 2012 Rank 15 Aligned Residues 113 % Identity 19% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																				.	.	.	.	60	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	D	S	T	L	N	P	L	W	Q	R	Y	I	L	A	V	Q	E	E	V	K	P	A	L	G	C	T	E	P	I	S	L	A	L	A	A	A	V	A	A	A	E	L	E	G	P	V	E	R	V	E	A	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	N	L	M	K
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G	T	R	F	E	F	E	C	Y	D	T	S	H	L	Y	N	L	A	H	F	V	D	R	K	L	A	T	P	P	F	F	V	Q	T	V	F	G	L	L	G	G	I	G	P	H	P	E	D	L	A	H	X	R	R	T	A	D	R	L	F	G
Template Known Secondary structure																			T	T	T									S													T	T		S		S	S								S		T	T	S																				G
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		N	G	L	G	V	T	V	P	G	T	G	M	V	G	L	P	I	A	A	A	L	G	A	L	G	G	N	A	N	A	G	L	E	.	.	.	.	.	.	.	.	V	L	K	D	A	T	A	Q	A	I	A	D	A	K	A	L	L	A	A
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	Y	V	W	S	I	L	G	A	G	R	H	Q	I	P	L	A	S	I	G	A	A	Q	G	A	N	V	R	V	G	L	E	D	S	L	W	I	A	P	G	E	L	A	E	T	N	A	A	Q	V	R	K	I	R	Q	V	I	E	G
Template Known Secondary structure		G	G									G	G	G										T	T	T							T	T	T		S				T	T				S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions