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Job Description | P42626 | Confidence | 10.38% | Date | Thu Jan 5 12:01:57 GMT 2012 |
Rank | 33 | Aligned Residues | 77 |
% Identity | 17% | Template | c3c1zA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna integrity scanning protein disa; |
PDBTitle: structure of the ligand-free form of a bacterial dna damage2 sensor protein
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Resolution | 2.30 Å |
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141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | C | V | T | I | V | G | G | H | T | N | I | V | H | I | E | T | H | D | G | V | V | F | T | Q | Q | A | C | V | A | E | G | E | Q | E | S | P | L | T | V | L | S | R | T | . |
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T | L | A | E | I | L | K | F | V | N | E | V | P | F | A | A | I | R | F | I | L | D | S | A | K | L | N | C |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | V | I | A | V | S | R | R | R | N | I | I | S | L | Y | Y | K | N | Y | K | Y | V | V | N | Q | V | D | F | L | I | S | K | V | T | Q | A | I | S | T | L | E | K | Y | K | D | N | F | N | K | L | L | S | E | L | E | V | L | E | L | E | N | R | V | T | L | A | D | V | V | R | T | L | A | K | G | F | E | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
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213 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | L | S | Q | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | I | V | E | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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201 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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