Return to main results Retrieve Phyre Job Id

Job DescriptionP42626
Confidence10.38%DateThu Jan 5 12:01:57 GMT 2012
Rank33Aligned Residues77
% Identity17%Templatec3c1zA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna integrity scanning protein disa; PDBTitle: structure of the ligand-free form of a bacterial dna damage2 sensor protein
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180.... .....190.........200.........210..
Predicted Secondary structure 






















........



Query SS confidence 











































. . . . . . . .



























Query Sequence  ACVTIVGGHTNIVHIETHDGVVFTQQACVAEGEQESPLTVLSRT. . . . . . . . TLAEILKFVNEVPFAAIRFILDSAKLNC
Query Conservation 
 
 
   




 
  

 

                      ........

  
         
 
 

   
  
 
Alig confidence 











































........



























Template Conservation 










 


   
  
 
     


  



 


 

  
   
  
  

    


 

    
  
   
Template Sequence  KVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVLELENRVTLADVVRTLAKGFELL
Template Known Secondary structure  S
SSSS
TT

TT

B
Template Predicted Secondary structure 













Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   213....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  ALSQE
Query Conservation   

 
Alig confidence 




Template Conservation 

  
Template Sequence  RIVEE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   201....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions