Job Description P33195 Confidence 99.92% Date Thu Jan 5 11:51:15 GMT 2012 Rank 19 Aligned Residues 330 % Identity 19% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																																												.																					.
Query SS confidence																																																												.																					.
Query Sequence		I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	.	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	.
Query Conservation																																																												.																					.
Alig confidence																			.																																									.																					.
Template Conservation																			.
Template Sequence		Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	.	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A
Template Known Secondary structure													T			S			.					S	S	T	T	T																				T	T	T						S	S												T	T							B		T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
											627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.		.	.	.	.	650	.	.	.	.	.	.	.	.					.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																				.														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																				.														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	.	L	S	C	I	M	V	T	Y	P	S	T	H	G	.	.	.	.	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T
Query Conservation		.	.	.	.	.	.	.	.	.																				.														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																				.														.	.	.	.
Template Conservation
Template Sequence		F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I
Template Known Secondary structure		T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B																	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		693	.	.	.	.	.																	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.		.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		S	P	G	F	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	.	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	F	P	T	Y	G
Template Known Secondary structure						G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S								S	G	G	G													.	.	.	.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.												300	.	.	.	.	.	.	.
		756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																														.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.																														.	.	.	.	.
Template Sequence		G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	.	.	.	.	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	Q	Q	A	G	G	.	.	.	.	.	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A
Template Known Secondary structure																		T	T		.	.	.	.																					T	T							S	.	.	.	.	.	S										S	T	T	S		G	G	G
Template Predicted Secondary structure																					.	.	.	.																														.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
			819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.		.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.
Predicted Secondary structure		.																																						.
Query SS confidence		.																																						.
Query Sequence		.	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	.	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q	V	K	A	G	V	W	P	L	E	D	N	P
Query Conservation		.																																						.
Alig confidence		.																																						.
Template Conservation
Template Sequence		L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A	A	N	I	K	G	L	T	F	T	Y	E	P	K	V
Template Known Secondary structure																		S						B		T	T	T		S	B				S										T	T	T																			T	G	G	G											S	S
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		897	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	H
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		461	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions