Job Description P33195 Confidence 99.68% Date Thu Jan 5 11:51:15 GMT 2012 Rank 85 Aligned Residues 328 % Identity 13% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A
Query Conservation
Alig confidence																.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		D	Y	V	G	S	W	G	P	A	I	V	G	H	A	.	.	.	.	H	P	E	V	I	D	A	L	H	A	A	L	E	K	G	T	S	F	G	A	P	C	.	.	.	.	.	.	.	.	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	S	V	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A
Template Known Secondary structure			S	S	T	T	T	T	T		T	T		B	T	.	.	.	.													T	T		S			S	S			.	.	.	.	.	.	.	.															S	S		S						S	S
Template Predicted Secondary structure																.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	.	T	Y	P	S	T	H
Query Conservation																																																																											.
Alig confidence										.	.	.	.	.	.																	.	.	.	.	.	.	.	.										.	.	.	.	.																						.
Template Conservation										.	.	.	.	.	.																	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Sequence		V	L	R	L	M	R	A	Y	.	.	.	.	.	.	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	G	H	.	.	.	.	.	.	.	.	A	A	T	L	T	A	P	Y	N	.	.	.	.	.	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	G	V	I	L	E	P	V	V	G	N	A
Template Known Secondary structure										.	.	.	.	.	.		T									T						.	.	.	.	.	.	.	.								T	T	.	.	.	.	.												S	T	T	T								S	S	B		S	S
Template Predicted Secondary structure										.	.	.	.	.	.																	.	.	.	.	.	.	.	.										.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		658	.	660				.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.		.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure					.	.	.																												.
Query SS confidence					.	.	.																												.
Query Sequence		G	V	Y	.	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	.	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F
Query Conservation					.	.	.																												.
Alig confidence					.	.	.																												.																									.	.	.	.					.
Template Conservation																																																												.	.	.	.					.
Template Sequence		G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	G	A	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	V	I	G	.	.	.	.	G	G	L	P	.	V	G	A	Y	G	G	R	A	E	I	M	K	M
Template Known Secondary structure		S		B				T	T												T	T								T	T	T	T	T	T	T		T	T							T				S						G	G	G	G	.	.	.	.	T	T	S		.												T	T
Template Predicted Secondary structure																																																												.	.	.	.					.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	H	E	V	C	G	G	H	I	S	G	M	F	G
Template Known Secondary structure		S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																						T	S	T	T																						T	T	T									T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.															.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
				811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E
Query Conservation		.	.
Alig confidence		.	.																																								.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	.	.	.	.	.	E	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T	V	L	S	Q
Template Known Secondary structure				S	S	S				S	S					T	T	S															T	T					S	S	T	T	.	.	.	.	.	S						T	T																		T	T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.						.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions