Job Description P33195 Confidence 99.62% Date Thu Jan 5 11:51:15 GMT 2012 Rank 95 Aligned Residues 334 % Identity 16% Template d2byla1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.15

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	.	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation																															.
Alig confidence																.	.	.	.												.																	.	.	.	.	.	.	.																											.
Template Conservation																.	.	.	.																													.	.	.	.	.	.	.																											.
Template Sequence		D	F	L	S	S	I	S	A	V	N	Q	G	H	C	.	.	.	.	H	P	K	I	V	N	A	L	K	S	Q	V	D	K	L	T	L	T	S	R	A	F	Y	N	N	V	L	G	.	.	.	.	.	.	.	E	Y	E	E	Y	I	T	K	L	F	N	Y	H	K	V	L	P	M	N	T	G	V	E	A	G	E	.
Template Known Secondary structure			S	S					T		T	T		B	T	.	.	.	.													T	T						T	T	S			S	S			.	.	.	.	.	.	.											T		S						S	S							.
Template Predicted Secondary structure																.	.	.	.																													.	.	.	.	.	.	.																											.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.				.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630								.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																																							.	.	.	.	.	.	.
Query SS confidence																	.	.	.																																							.	.	.	.	.	.	.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	.	.	.	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	.	.	.	.	.	.	.	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S
Query Conservation																	.	.	.																																							.	.	.	.	.	.	.
Alig confidence																	.	.	.																																							.	.	.	.	.	.	.												.	.
Template Conservation																																																																												.	.
Template Sequence		T	A	C	K	L	A	R	K	W	G	Y	T	V	K	G	I	Q	K	Y	K	A	K	I	V	F	A	A	G	N	F	W	G	R	T	L	S	A	I	S	S	S	T	D	P	T	S	Y	D	G	F	G	P	F	M	P	G	F	D	I	I	P	Y	N	D	L	P	A	L	E	R	A	L	Q	D	.	.	P	N	V	A
Template Known Secondary structure														T	T				T	T								T	T						S					T	T								T	T	S		S			T	T						T	T										T	S	.	.	T	T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.
		648	.	650	.	.	.		.	.	.	.	.	.	660					.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.									.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure								.								.	.	.	.																																						.	.	.	.	.	.	.	.
Query SS confidence								.								.	.	.	.																																						.	.	.	.	.	.	.	.
Query Sequence		C	I	M	V	T	Y	.	P	S	T	H	G	V	Y	.	.	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	.	.	.	.	.	.	.	.	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H
Query Conservation								.								.	.	.	.																																						.	.	.	.	.	.	.	.
Alig confidence								.								.	.	.	.			.																						.	.	.	.										.	.	.	.	.	.	.	.						.	.	.	.	.	.
Template Conservation																						.																						.	.	.	.																							.	.	.	.	.	.
Template Sequence		A	F	M	V	E	P	I	Q	G	E	A	G	V	V	V	P	D	P	G	Y	.	L	M	G	V	R	E	L	C	T	R	H	Q	V	L	F	I	A	D	E	I	Q	.	.	.	.	T	G	L	A	R	T	G	R	W	L	A	V	D	Y	E	N	V	R	P	D	I	V	.	.	.	.	.	.	L	L	G	K	A	L
Template Known Secondary structure							S	S	B	T	T	T	T	S	B				T	T		.												T								T	T	.	.	.	.	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure																						.																						.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		S	G	G	L	Y	P	V	S	A	V	L	C	D	D	D	I	M	L	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	E	H	F	S	T	Y	G	G	N	P	L	G	C	R	V	A	I	A	A	L	E	V	L	E	E	E	N	L	A	.	.	.	E	N	A	D	K	L	G	I	I	L	R	N
Template Known Secondary structure		G	T	T	S	S													T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S			S	S	T	T																		T	T			.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.														.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.
		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850		.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D
Query Conservation																																																										.
Alig confidence																									.	.	.	.																									.	.	.	.		.
Template Conservation																									.	.	.	.																									.	.	.	.
Template Sequence		E	L	M	K	L	P	S	D	V	V	T	A	V	R	G	K	G	L	L	N	A	I	V	.	.	.	.	I	K	E	T	K	D	W	D	A	W	K	V	C	L	R	L	R	D	N	G	L	L	A	K	.	.	.	.	P	T	H	G	D	I	I	R	F	A	P	P	L	V	I	K	E	D	E	L	R	E	S	I	E
Template Known Secondary structure					T	S		T	T	T								T	T						.	.	.	.					S	S													T	T					.	.	.	.				T	T								T	T
Template Predicted Secondary structure																									.	.	.	.																									.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		874	.	.	.	.	.	880	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	A	I	R	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	N	K	T	I	L	S
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions