Job Description P33195 Confidence 99.69% Date Thu Jan 5 11:51:15 GMT 2012 Rank 80 Aligned Residues 330 % Identity 12% Template d2bkwa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.57

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																																															.
Query SS confidence																																	.	.																																															.
Query Sequence		L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	.
Query Conservation																																	.	.																																															.
Alig confidence								.																									.	.														.									.	.	.	.	.																				.
Template Conservation								.																																								.									.	.	.	.	.
Template Sequence		L	G	H	T	S	P	.	E	F	V	S	I	F	Q	R	V	L	K	N	T	R	A	V	F	K	S	A	A	A	S	K	S	Q	P	F	V	L	A	G	S	G	T	L	G	W	D	.	I	F	A	S	N	F	I	L	.	.	.	.	.	S	K	A	P	N	K	N	V	L	V	V	S	T	G	T	F	S	D	R	F
Template Known Secondary structure				T	T	S		.																	T	T			G	G	G	T								S		T	T					.							S		.	.	.	.	.	T	T		S									S	S
Template Predicted Secondary structure								.																																								.									.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
			610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.			.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure		.																					.																																															.	.
Query SS confidence		.																					.																																															.	.
Query Sequence		.	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	.	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	.	.	G	Q	V	Y	L	D	G	A	N	M
Query Conservation		.																					.																																															.	.
Alig confidence		.																					.													.	.																																	.	.
Template Conservation																																				.	.
Template Sequence		A	D	C	L	R	S	Y	G	A	Q	V	D	V	V	R	P	L	K	I	G	E	S	V	P	L	E	L	I	T	E	K	L	S	Q	.	.	N	S	Y	G	A	V	T	V	T	H	V	D	T	S	T	A	V	L	S	D	L	K	A	I	S	Q	A	I	K	Q	T	S	P	E	T	F	F	V	V	D	A	V	C	S
Template Known Secondary structure								T	T									S	S	T	T	S														.	.	S			S						S			T	T	T	T																	T	T	S							T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.										.								.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.										.								.	.	.	.	.
Template Sequence		I	G	C	E	E	F	E	.	F	D	E	W	G	V	D	F	A	.	L	T	A	S	Q	A	I	.	.	.	.	.	G	A	P	A	G	L	S	I	S	L	C	S	S	R	F	X	D	Y	A	L	N	D	S	K	N	G	H	V	H	G	Y	F	S	S	L	R	R	W	T	P	I	X	E	N	Y	E	A	G	K	G
Template Known Secondary structure		T	T	T	S				.	T	T	T	T	T		S			.								.	.	.	.	.				S																T									S		S	T	T														T	T
Template Predicted Secondary structure									.										.								.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.		.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	.	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L
Query Conservation																																																													.
Alig confidence																																																													.										.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		A	Y	F	A	T	P	P	V	Q	L	I	N	S	L	D	V	A	L	K	E	I	L	E	E	G	L	H	K	R	W	D	L	H	R	E	X	S	D	W	F	K	D	S	L	V	N	G	L	Q	L	T	S	V	S	R	Y	P	S	N	X	S	A	H	G	L	T	A	V	Y	.	.	.	.	.	.	V	A	D	P	P
Template Known Secondary structure				S	S																																										T	T	T					S	S		S	S	S	T	T	B		S	S						.	.	.	.	.	.		S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.							.	.	.	.	.
		832	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850			.	.	.	.	.	.	.	.	.	860		.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure																					.	.											.
Query SS confidence																					.	.											.
Query Sequence		D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	.	V	A	G	T	L	M	V	E	P	T	.	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation																					.	.											.
Alig confidence																					.	.											.
Template Conservation
Template Sequence		D	V	I	A	F	L	K	S	H	G	V	V	I	A	G	G	I	H	K	D	I	G	P	K	Y	I	R	I	G	H	X	G	V	T	A	C	N	K	N	L	P	Y	X	K	N	C	F	D	L	I	K	L	A	L	Q	R
Template Known Secondary structure										T	T				B					T	T	T	G	G	G								G	G	G	T	S	S	T	T		T													T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions