Job Description P33195 Confidence 100.00% Date Thu Jan 5 11:51:15 GMT 2012 Rank 2 Aligned Residues 418 % Identity 31% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		R	H	I	G	P	D	A	A	Q	Q	Q	E	M	L	N	A	V	G	A	Q	S	L	N	A	L	T	G	Q	I	V	P	K	D	I	Q	L	A	T	P	P	Q	V	G	A	P	A	T	E	Y	A	A	L	A	E	L	K	A	I	A	S	R	N	.	K	R	F	T	S	Y	I	G	M	G	Y	T	A	V	Q	L	P
Query Conservation																																																																.
Alig confidence																														.						.																												.
Template Conservation																														.						.
Template Sequence		D	Y	T	P	H	T	E	E	E	I	R	E	M	L	R	R	V	G	A	A	S	L	E	D	L	F	A	H	.	L	P	K	E	I	.	L	S	P	P	I	D	L	P	E	P	L	P	E	W	K	V	L	E	E	L	R	R	L	A	A	Q	N	L	P	A	H	K	A	F	L	G	G	G	V	R	S	H	H	V	P
Template Known Secondary structure																			T		S	S	T	G	G	G	G	T	T	.	S		G	G	G	.	S	S																								T	S				T	T					S	S
Template Predicted Secondary structure																														.						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	L	R	N	M	L	E	N	P	G	W	Y	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	R	L	E	A	L	L	N	F	Q	Q	V	T	L	D	L	T	G	L	D	M	A	S	A	S	L	L	D	E	A	T	A	A	A	E	A	M	A	M	A	K	R	V	S	K	L	K	N	A	N	R	F	F	V
Query Conservation
Alig confidence						.																																																																					.	.	.
Template Conservation						.																																																																					.	.	.
Template Sequence		P	V	V	Q	.	A	L	A	A	R	G	E	F	L	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	E	Y	Q	T	M	I	A	E	L	A	G	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L	A	E	G	V	L	L	A	L	R	E	T	G	R	M	.	.	.	G	V	L	V
Template Known Secondary structure						.				T	S								S			S	G	G	G																				T	S	S				S		B	S	S																	T			.	.	.
Template Predicted Secondary structure						.																																																																					.	.	.
Template SS confidence
		80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		A	S	D	V	H	P	Q	T	L	D	V	V	R	T	R	A	E	T	F	G	F	E	V	I	V	D	D	A	Q	K	.	.	.	.	.	V	L	D	H	Q	D	V	F	G	V	L	L	Q	Q	V	G	T	T	G	E	I	H	D	Y	T	A	L	I	S	E	L	K	S	R	K	I	V	V	S	V	A	A	D	I	M
Query Conservation																																.	.	.	.	.
Alig confidence																																.	.	.	.	.
Template Conservation
Template Sequence		S	Q	G	V	H	P	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A	K	L	L	T	L	P	L	E	G	G	R	T	P	L	P	E	V	G	E	E	V	G	A	V	V	V	Q	N	P	N	F	L	G	A	L	E	D	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L
Template Known Secondary structure			T	T	S															T	T									B	T	T	B								T	T								S	S		T	T	S	B														T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	L	L	T	A	P	G	K	Q	G	A	D	I	V	F	G	S	A	Q	R	F	G	V	P	M	G	Y	G	G	P	H	A	A	F	F	A	A	K	D	E	Y	K	R	S	M	P	G	R	I	I	G	V	S	K	D	A	A	G	N	T	A	L	R	M	A	M	Q	T	R	E	Q	H	I	R	R	E	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	G	V	L	K	P	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T	K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E	T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A
Template Known Secondary structure		G	G	G	T	S							T		S							T	T	T	T				G	G	G		S									G	G	G	G	G	G			S									T	T	S									G	G	G	S					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.					.															.
Query SS confidence																																																		.					.															.
Query Sequence		N	S	N	I	C	T	S	Q	V	L	L	A	N	I	A	S	L	Y	A	V	Y	H	G	P	V	G	L	K	R	I	A	N	R	I	H	R	L	T	D	I	L	A	A	G	L	Q	Q	K	.	G	L	K	L	.	R	H	A	H	Y	F	D	T	L	C	V	E	V	A	.	D	K	A	G	V	L	T	R	A	E	A
Query Conservation																																																		.					.															.
Alig confidence																																																		.					.															.
Template Conservation
Template Sequence		K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H	K	L	H	A	L	L	L	E	V	P	G	V	R	P	F	T	P	K	P	F	F	N	E	F	A	L	A	L	P	K	D	P	E	A	V	R	R	A	L	A	E
Template Known Secondary structure		S					S																																								T	T	S	T	T					S		S	S	B		S							S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		408	.	410	.	.	.	.	.						.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		A	E	I	N	L	R	S	D	.	.	.	.	.	I	L	N	A	V	G	I	T	L	D	E	T	T	T	R	E	N	V	M	Q	L	F	N	V	L
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		R	G	F	H	G	A	T	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E	L	H	E	E	E	D	L	L	A	L	R	E	A	L
Template Known Secondary structure		T	T									T	T	S		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.