Job Description P33195 Confidence 99.27% Date Thu Jan 5 11:51:15 GMT 2012 Rank 190 Aligned Residues 332 % Identity 17% Template d1v2da_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	V	G	A	P	A	T	E	Y	A	A	L	A	E	L	K	A	I	A	S	R	N	K	R	F	T	S	Y	I	G	M	G	Y	T	A	V	Q	L	P	P	V	I	L	R	N	M	L	E	N	P	G	W	Y	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	R	L	E	A	L	L	N	F	Q	Q	V	T	L
Query Conservation
Alig confidence							.																		.						.																														.	.	.	.	.							.	.	.	.
Template Conservation							.																		.						.																														.	.	.	.	.							.	.	.	.
Template Sequence		M	R	L	H	P	.	R	T	E	A	A	I	F	P	R	M	S	G	L	A	Q	R	L	.	G	A	V	N	L	.	G	Q	G	F	P	S	N	P	P	P	P	F	L	L	E	A	V	R	R	A	L	G	R	Q	D	Q	Y	A	P	.	.	.	.	.	P	A	G	L	P	A	.	.	.	.	L	R	E	A	L	A
Template Known Secondary structure						G	.	G	G	G	G														.	T					.				S		S	S														T	T	T	S		S				.	.	.	.	.	T	T					.	.	.	.
Template Predicted Secondary structure							.																		.						.																														.	.	.	.	.							.	.	.	.
Template SS confidence
		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.					.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.
Query Sequence		D	L	T	G	L	D	M	A	S	A	S	L	L	D	E	A	T	A	A	A	E	A	M	A	M	A	K	R	V	S	K	L	K	N	A	N	R	F	F	V	A	S	D	V	H	P	Q	T	L	D	V	V	R	T	R	A	E	T	F	.	.	.	.	.	.	.	.	.	G	F	E	V	I	V	D	D	A	Q	K	V
Query Conservation																																																													.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		E	E	F	A	V	E	P	E	S	V	V	V	T	S	G	A	T	E	A	L	Y	V	L	L	Q	S	L	V	G	P	G	D	.	.	.	.	E	V	V	V	L	E	P	F	F	D	V	Y	L	P	D	A	F	L	A	G	A	K	A	R	L	V	R	L	D	L	T	P	E	G	F	R	L	D	L	S	A	L	E	K
Template Known Secondary structure					T	S		G	G	G					S	S															T	T		.	.	.	.							S			T	T								T	T												T	T											T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																					.	.	.	.	.	.
Query Sequence		L	D	H	Q	D	V	F	G	V	L	L	Q	Q	V	G	T	.	.	.	.	T	G	E	I	H	D	Y	T	A	L	I	S	E	L	K	S	R	K	I	V	V	S	V	A	A	D	I	M	A	L	V	L	L	T	A	P	.	.	.	.	.	.	G	K	Q	G	A	D	I	V	F	G	S	A	Q	R	F	G	V	P
Query Conservation																		.	.	.	.																																					.	.	.	.	.	.
Alig confidence																		.	.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	T	P	R	T	R	A	L	L	L	N	T	P	M	N	P	T	G	L	V	F	G	E	R	E	L	E	A	I	A	R	L	A	R	A	H	D	L	F	L	I	S	D	E	V	Y	D	E	L	Y	Y	G	E	R	P	R	R	L	R	E	F	A	P	E	R	T	F	T	V	G	S	A	G	K	R	L	E	A	T
Template Known Secondary structure		T			T	T								S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S										T	T	T											T	T		G
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	Y	G	G	P	H	A	A	F	F	A	A	K	D	E	Y	K	R	S	M	P	G	R	I	I	G	V	S	K	D	A	A	G	N	T	A	L	R	M	A	M	Q	T	R	E	Q	H	I	R	R	E	K	A	N	S	N	I	C	T	S	Q	V	L	L	A	N	I	A	S	L	Y	A	V	Y	H	G	P	V	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	I	V	G	P	K	E	F	M	P	R	L	A	G	M	R	Q	W	T	S	F	S	A	P	T	P	L	Q	A	G	V	A	E	A	L	K	L	A	R	R	E	G	F
Template Known Secondary structure		G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T												T	S	S																			T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.																																	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.									.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																													.	.																																.	.	.	.	.	.	.	.
Query SS confidence																													.	.																																.	.	.	.	.	.	.	.
Query Sequence		L	K	R	I	A	N	R	I	H	R	L	T	D	I	L	A	A	G	L	Q	Q	K	G	L	K	L	R	.	.	H	A	H	Y	F	D	T	L	C	V	E	V	A	D	K	A	G	V	L	T	R	A	E	A	A	E	I	N	L	R	S	.	.	.	.	.	.	.	.	D	I	L	N	A	V	G	I	T	L	D	E
Query Conservation																													.	.																																.	.	.	.	.	.	.	.
Alig confidence																													.	.						.	.								.																	.	.	.	.	.	.	.	.											.	.
Template Conservation																																				.	.								.																																			.	.
Template Sequence		Y	E	A	L	R	E	G	Y	R	R	R	R	D	L	L	A	G	G	L	R	A	M	G	L	R	V	Y	V	P	E	G	T	Y	F	.	.	L	M	A	E	L	P	G	.	W	D	A	F	R	L	V	E	E	A	R	V	A	L	I	P	A	S	A	F	Y	L	E	D	P	P	K	D	L	F	R	F	A	F	.	.
Template Known Secondary structure																							T	T							S	B	S	S		.	.						T	T	.										T							G	G	G	G		S	S	S			T	T							.	.
Template Predicted Secondary structure																																				.	.								.																																			.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		427	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	T	R	E	N	V	M	Q	L	F	N	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	K	T	E	E	E	L	H	L	A	L	E	R	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions