Job Description P33195 Confidence 99.47% Date Thu Jan 5 11:51:15 GMT 2012 Rank 141 Aligned Residues 345 % Identity 13% Template d1u08a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.35

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		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.		.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure																																															.																																.	.	.
Query SS confidence																																															.																																.	.	.
Query Sequence		M	M	R	Y	M	H	S	L	E	R	K	D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	.	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	.
Query Conservation																																															.																																.	.	.
Alig confidence												.	.	.	.	.																															.							.	.	.																							.	.	.
Template Conservation												.	.	.	.	.																																						.	.	.
Template Sequence		I	F	T	Q	M	S	A	L	A	Q	.	.	.	.	.	Q	H	Q	A	I	N	L	S	Q	G	F	P	D	F	D	G	P	R	Y	L	Q	E	R	L	A	H	H	V	A	Q	G	A	N	Q	Y	A	P	.	.	.	M	T	G	V	Q	A	L	R	E	A	I	A	Q	K	T	E	R	L	Y	G	Y	Q	P	D	A
Template Known Secondary structure												.	.	.	.	.		T	T							S	S		S	S																T	T			S				.	.	.	T	T																		S					T
Template Predicted Secondary structure												.	.	.	.	.																																						.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
				564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.		.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure		.	.																																																																		.
Query SS confidence		.	.																																																																		.
Query Sequence		.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	.	N	I	D	L	T	D	L	R	A	K	A	E
Query Conservation		.	.																																																																		.
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.																																						.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		D	S	D	I	T	V	T	A	G	A	T	E	A	L	Y	A	A	I	T	A	L	.	.	.	.	.	.	.	.	.	V	R	N	G	D	E	V	I	C	F	D	P	S	Y	D	S	Y	A	P	A	I	A	L	S	G	G	I	V	K	R	M	A	L	Q	P	P	H	F	R	V	D	W	Q	E	F	A	A	L	L	S
Template Known Secondary structure		T	T	T					S	S													.	.	.	.	.	.	.	.	.			T	T								S			T	T								T	T										T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		641	.	.	.	.	.	.	.	.	650	.	.				.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.								.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure														.	.	.																																	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																	.	.	.	.	.	.	.
Query Sequence		Q	A	G	D	N	L	S	C	I	M	V	T	.	.	.	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F
Query Conservation														.	.	.																																	.	.	.	.	.	.	.
Alig confidence		.	.	.										.	.	.																																	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	E	R	T	R	L	V	I	L	N	T	P	H	N	P	S	A	T	V	W	Q	Q	A	D	F	A	A	L	W	Q	A	I	A	G	H	E	I	F	V	I	S	D	E	V	Y	E	H	I	N	F	S	Q	Q	G	H	A	S	V	L	A	H	P	Q	L	R	E	R	A	V	A	V	S	S	F	G	K	T	Y
Template Known Secondary structure		.	.	.	T	T								S	S		T	T	T																	T	T	S									T	T	T	T		B			S	S					G	G	G	S					T	T											T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N
Query Conservation
Alig confidence					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	M	T	.	.	.	.	G	W	K	V	G	Y	C	V	A	P	A	P	I	S	A	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	V	H	Q	Y	L	T	F	S	V	N	T	P	A	Q	L	A	L	A	D	M	L	R	A	E	P	E	H	Y	L	A	L	P	D	F	Y	R	Q	K	R	D
Template Known Secondary structure		T		G	.	.	.	.	G	G																.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	S	S																	T					T
Template Predicted Secondary structure					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.															.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.		.	.	.	.	.	850	.	.	.					.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure																																																			.						.										.	.	.	.
Query SS confidence																																																			.						.										.	.	.	.
Query Sequence		Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	.	Y	G	F	H	A	.	P	T	M	S	F	P	V	A	G	.	.	.	.	T	L	M	V	E	P	T	E	S	E	S
Query Conservation																																																			.						.										.	.	.	.
Alig confidence																								.	.	.	.	.	.																						.						.										.	.	.	.								.	.
Template Conservation																								.	.	.	.	.	.																																																	.	.
Template Sequence		I	L	V	N	A	L	N	E	S	R	L	E	I	L	P	C	E	G	T	Y	F	L	.	.	.	.	.	.	L	V	D	Y	S	A	V	S	T	L	D	D	V	E	F	C	Q	W	L	T	Q	E	H	G	V	A	A	I	P	L	S	V	F	C	A	D	P	F	P	H	K	L	I	R	L	C	F	A	.	.	K	K
Template Known Secondary structure							T	T	S	S	S								B	S	S			.	.	.	.	.	.					T	T	T			S													S							G	G	G	G		S	S				S									.	.	S
Template Predicted Secondary structure																								.	.	.	.	.	.																																																	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.							.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	E	L	D	R	F	I	D	A	M	L	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	T	L	L	A	A	A	E	R	L	R	Q	L
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions