Job Description P33195 Confidence 99.85% Date Thu Jan 5 11:51:15 GMT 2012 Rank 30 Aligned Residues 358 % Identity 14% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		503	.	.	.	.	.	.			510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.			.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																			.																																								.	.
Query SS confidence									.	.																			.																																								.	.
Query Sequence		N	Q	A	M	I	P	L	.	.	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	.	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	.	.	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation									.	.																			.																																								.	.
Alig confidence									.	.																			.												.	.	.																										.	.
Template Conservation																																									.	.	.
Template Sequence		G	H	P	L	V	Y	L	D	N	A	A	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	.	.	.	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	S	P	R	E	I	V	Y	T	R	N	A	T	E	A	I	N
Template Known Secondary structure		T							B	T	T	T																			T							S			.	.	.																			T	T		S		G	G	G					S	S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.					.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	.	.	.	.	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y
Query Conservation																																								.	.	.	.
Alig confidence																	.	.	.	.																				.	.	.	.																										.	.	.
Template Conservation																	.	.	.	.																																																	.	.	.
Template Sequence		L	V	A	Y	S	W	G	M	N	N	L	K	A	G	D	.	.	.	.	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	L	D	E	Q	E	S	F	D	L	E	H	F	K	T	L	L	S	.	.	.	E	K	T	K	L	V	T	V	V	H
Template Known Secondary structure							T							T	T		.	.	.	.						T	T			G	G	G	T																			B		T	T	S	S	B											.	.	.	T	T								S
Template Predicted Secondary structure																	.	.	.	.																																																	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F
Query Conservation
Alig confidence																																		.																									.	.	.	.	.	.
Template Conservation																																		.																									.	.	.	.	.	.
Template Sequence		I	S	N	T	L	G	C	V	N	P	A	E	E	I	A	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	.	A	P	H	Y	P	L	D	V	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	.	.	.	.	.	.	A	P	T	G	I	G	F	L	Y	G	K	E	E	I	L	E	A
Template Known Secondary structure		B		T	T	T		B	B													T	T								T	T	T	.	T	T	T	S								T		S						G	G	G	T	T	.	.	.	.	.	.	S		T	T
Template Predicted Secondary structure																																		.																									.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.									.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	.	.	.	.	.	.	.	.	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	P	P	F	F	G	G	G	E	M	I	A	E	V	F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T	H	Y	L	W	Q	G	L	G	Q	I	P	Q	L	R	L	Y
Template Known Secondary structure		S				S		S	T	T	S						S	S							T	T	G	G	G			S	S																																									T		T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		806	.	.	.	810	.	.	.	.		.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850										.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure											.																																					.	.	.	.	.	.	.	.	.
Query SS confidence											.																																					.	.	.	.	.	.	.	.	.
Query Sequence		G	R	D	G	R	V	A	H	E	.	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	.	.	.	.	.	.	.	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M
Query Conservation											.																																					.	.	.	.	.	.	.	.	.
Alig confidence											.							.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		G	P	N	P	K	H	G	D	R	A	A	L	A	S	F	N	.	.	.	.	V	A	G	L	H	A	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	H	R	L	F	D	A	S	G	S	A	R	A	S	L	Y	F	Y	N	T	K	E	E	I	D	L	F	L	Q	S	L
Template Known Secondary structure		S			G	G	G	S		B		S						.	.	.	.		T	T	B											T	T	T				B		S		T	T								T	T											T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		876	.	.	.	880	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	R	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	T	I	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions