Job Description P33195 Confidence 99.54% Date Thu Jan 5 11:51:15 GMT 2012 Rank 118 Aligned Residues 353 % Identity 13% Template d1sffa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.90

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E
Query Conservation																																																																			.	.
Alig confidence																.	.	.	.												.	.										.	.	.																							.	.
Template Conservation																.	.	.	.												.	.										.	.	.
Template Sequence		D	F	A	G	G	I	A	V	L	N	T	G	H	L	.	.	.	.	H	P	K	V	V	A	A	V	E	A	Q	.	.	L	K	K	L	S	H	T	C	F	.	.	.	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V
Template Known Secondary structure			S	S					T		T	T		B	T	.	.	.	.												.	.	T	T	T		S				T	.	.	.	T	T	S																S	S		S	S								S	S
Template Predicted Secondary structure																.	.	.	.												.	.										.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.																.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.				.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	I	D	.	.	.	L	T	D	L	R	A	K
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence													.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		E	N	A	V	K	I	A	R	A	A	T	.	.	.	.	.	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I
Template Known Secondary structure													.	.	.	.	.	T								T	T					S	S							S	S			T	T	T	T	T	T	S					S	S								B	G	G	G	T	B
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		639	640	.	.			.	.	.	.	.	.	.	650	.		.	.	.	.	.	.	.	.	660	.	.				.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.			.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure						.	.										.												.	.	.																							.	.
Query SS confidence						.	.										.												.	.	.																							.	.
Query Sequence		A	E	Q	A	.	.	G	D	N	L	S	C	I	M	V	.	T	Y	P	S	T	H	G	V	Y	E	E	.	.	.	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F
Query Conservation						.	.										.												.	.	.																							.	.
Alig confidence						.	.										.												.	.	.																							.	.
Template Conservation
Template Sequence		F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I
Template Known Secondary structure					T			G	G	G								S	B		T	T	T	T	S		B																	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	S			S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N
Query Conservation
Alig confidence		.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	A	G	G	F	P	.	L	A	G	V	T	G	R	A	E	V	M	D	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K
Template Known Secondary structure		.	.	.	.	G	T	S	S		.												T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S			S	S	S	S																		T	T
Template Predicted Secondary structure		.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						271	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.														290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		791	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Y	I	A	S	R	L	.	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D
Query Conservation								.
Alig confidence								.																																																	.
Template Conservation																																																									.
Template Sequence		D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	.	L	S	C	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R
Template Known Secondary structure										T		T	T								T	T							B	G	G	G		T	T	S	B															T	T				.				S	T	T	S									T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	L	E	I	I	S	Q	C	F	D	E	A	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions