Job Description P33195 Confidence 99.81% Date Thu Jan 5 11:51:15 GMT 2012 Rank 44 Aligned Residues 345 % Identity 12% Template d1s0aa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.71

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y
Query Conservation																																																																			.
Alig confidence																.	.	.	.												.	.										.	.	.																							.
Template Conservation																.	.	.	.												.	.										.	.	.
Template Sequence		D	G	M	S	S	W	W	A	A	I	H	G	Y	N	.	.	.	.	H	P	Q	L	N	A	A	M	K	S	Q	.	.	I	D	A	M	S	H	V	M	F	.	.	.	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E
Template Known Secondary structure			S	S	T	T	T	T	T		T	T		B	S	.	.	.	.												.	.					S					.	.	.	S	S																	S		T	T								S	S
Template Predicted Secondary structure																.	.	.	.												.	.										.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.																.	.	.	620	.	.	.	.	.				.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	Q	V	V	V	V	A	C	D	.	.	.	K	N	G	N	I	D	L	T	D	L	R	A	K	A
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M
Template Known Secondary structure															T										T	T					S	S					T	T	S		T	T	T	T	T	G	G	G	G	T	T	T	S											S	B						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.			.	.	.	.	.	660				.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.									.	700	.	.	.	.	.	.
Predicted Secondary structure																	.	.							.	.	.																																							.	.	.	.	.	.	.	.
Query SS confidence																	.	.							.	.	.																																							.	.	.	.	.	.	.	.
Query Sequence		E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	.	.	S	T	H	G	V	Y	.	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	.	.	.	.	.	.	.	.	A	D	V	S	H	L	N	L
Query Conservation																	.	.							.	.	.																																							.	.	.	.	.	.	.	.
Alig confidence																	.	.							.	.	.																									.	.	.	.											.	.	.	.	.	.	.	.					.	.	.	.
Template Conservation																																																				.	.	.	.																							.	.	.	.
Template Sequence		A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	.	.	.	.	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	.	.	.	.
Template Known Secondary structure					T	T	T								S	S				T	T	T				B		T														T								T	T	.	.	.	.	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.																							.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I
Query Conservation
Alig confidence		.	.																													.	.	.	.	.	.	.	.												.																								.	.	.
Template Conservation		.	.																													.	.	.	.	.	.	.	.												.																								.	.	.
Template Sequence		.	.	C	L	G	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	.	.	.	.	.	.	.	.	E	A	G	C	F	M	H	G	P	T	F	.	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	.	.	.	Q	Q	V	A
Template Known Secondary structure		.	.					T	T	S	S	S	S																	T	S	.	.	.	.	.	.	.	.	T	T	S	S		S				T	T	.	T	T																	T					.	.	.
Template Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.												.																								.	.	.
Template SS confidence
				271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.				.	.	.	.
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V
Query Conservation
Alig confidence																																				.	.	.	.	.																					.	.	.	.
Template Conservation																																				.	.	.	.	.																					.	.	.	.
Template Sequence		D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	.	.	.	.	.	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	.	.	.	.	P	F	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q
Template Known Secondary structure												G	G	G	G	G		T	T								T	T							S	.	.	.	.	.	S		B												T	T					.	.	.	.		B	T	T								T	T
Template Predicted Secondary structure																																				.	.	.	.	.																					.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.						.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		867	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D	E	T
Template Known Secondary structure														T	S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions