Job Description P33195 Confidence 99.91% Date Thu Jan 5 11:51:15 GMT 2012 Rank 21 Aligned Residues 318 % Identity 16% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.					.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																																						.	.	.	.	.	.
Query SS confidence																			.	.	.	.																																																						.	.	.	.	.	.
Query Sequence		Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	.	.	.	.	.	.
Query Conservation																			.	.	.	.																																																						.	.	.	.	.	.
Alig confidence																			.	.	.	.																						.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	.	.	.	.	.	.	.	.	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A
Template Known Secondary structure															T	T			T	T	T								S	S													T	.	.	.	.	.	.	.	.		T	T								G	G	G	T			G	G	G			B		S	S		B		S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
						617	.	.	620	.	.	.	.	.		.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.										.																																																																	.	.
Query SS confidence		.	.	.	.										.																																																																	.	.
Query Sequence		.	.	.	.	M	Q	V	V	V	V	A	C	D	.	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	.	.
Query Conservation		.	.	.	.										.																																																																	.	.
Alig confidence		.	.	.	.										.																.	.	.																				.																											.	.
Template Conservation																															.	.	.																				.
Template Sequence		T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	D	Y	D	R	L	E	E	N	A	R	.	.	.	L	F	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	D	.	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A
Template Known Secondary structure						S							B		T	T	T		S	B											.	.	.					S							S	S			S				.											T	T								T	T	T
Template Predicted Secondary structure																															.	.	.																				.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
			690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
Predicted Secondary structure		.																																																																														.	.
Query SS confidence		.																																																																														.	.
Query Sequence		.	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	.	.
Query Conservation		.																																																																														.	.
Alig confidence		.								.														.	.	.	.	.	.																							.	.	.	.	.	.																							.	.
Template Conservation										.														.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		G	V	V	P	S	P	F	E	.	H	C	H	V	V	T	T	T	T	H	K	T	L	.	.	.	.	.	.	R	G	C	R	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	.	.	.	.	.	.	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V
Template Known Secondary structure		T	S	S			G	G	G	.	T		S						S	S	G	G	G	.	.	.	.	.	.				S									S	B					B				.	.	.	.	.	.									T	T	T	T			S
Template Predicted Secondary structure										.														.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.							.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		767	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.		.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	.	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P
Query Conservation																																		.
Alig confidence																																		.							.	.	.														.	.	.	.
Template Conservation																																									.	.	.														.	.	.	.
Template Sequence		A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E	L	G	Y	K	I	V	T	.	.	.	G	G	S	D	N	H	L	I	L	V	D	L	R	.	.	.	.	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N
Template Known Secondary structure									T	S																								T	T				G	G	.	.	.	G	S		S	S	S						G	G	.	.	.	.	G	G	T													T	T
Template Predicted Secondary structure																																									.	.	.														.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.					.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		846	.	.	.	850							.	.	.	.	.	.	.	.	.	860	.	.	.	.	.					.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																.	.	.	.
Query SS confidence							.	.	.	.	.	.																.	.	.	.
Query Sequence		T	M	S	F	P	.	.	.	.	.	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	.	.	.	.	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q	V	K	A	G	V	W	P	L	E	D	N	P
Query Conservation							.	.	.	.	.	.																.	.	.	.
Alig confidence							.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E	L	T	V	Q	I	Q	D	D	T	G	P	R	A	T	L	K
Template Known Secondary structure						S	S		S		T	T	S														T	T																										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions