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Job DescriptionP33195
Confidence100.00%DateThu Jan 5 11:51:15 GMT 2012
Rank7Aligned Residues386
% Identity13%Templated1pmma_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   484.....490.........500.........510.........520.........530.........540.........550.........560...
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Query Sequence  SETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYD
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Template Sequence  RDDVAFQIINDELYLDGNARQNLA. . TFCQTWDDENVHKLMD. . . LSINKNWIDK. EEYPQSAAIDLRCVNMVADLWHAP
Template Known Secondary structure 
GGGS

GGGB
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   38.40.........50.........60. ........70....... ..80....... ..90.........100.........110.
 
   564.....570 .........580...... ...590.........600.........610.........620....... ..630..
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Query Sequence  . . AVCMQPN. . . . SGAQGEYAGLLAIRHY. . . . HESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKN. GNIDL
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Template Sequence  APKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDP
Template Known Secondary structure 

TTS

SSST


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SS

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BTTB
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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   633......640.........650.........660.........670..... ....680.........690.... .....700
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Query Sequence  TDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFG. . . . . . GQVYLDGANMNAQVGITSP. . . . . . GFIGAD
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Template Sequence  KRMIEACD. . . ENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVK
Template Known Secondary structure 

...TT
BBS
TTT
BB







TTGGGT
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STTSTT
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   192....... 200.........210.........220.........230.........240.........250.........260........
 
   701........710.........720.........730.........740.........750.........760.........770.........780
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Query Sequence  VSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKK
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Template Sequence  SISASGHKFGLAPLG. . . . . CGWVIWRDE. . EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTK
Template Known Secondary structure  TTTTT


SS.....
SSG..GGS
GGG
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   269270.........280... ......290.. .......300.........310.........320.........330.........340.
 
   781........790........ .800.........810.........820.........830.........840.........850 ....
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Query Sequence  ASQVAILNANYIASRLQD. . AFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFP. . . . VAGT
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Template Sequence  VQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDP. GYTLYDLSERLRLRGWQVPAFTLGGEATDIVV
Template Known Secondary structure  TTS


TTTBSS
TT


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TTT
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   342.......350.........360.........370.........380........ .390.........400.........410.........420
 
   855....860.........870.........880......
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Query Sequence  LMVEPTESESKVELDRFIDAMLAIRAEIDQVK
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Template Sequence  MRIMCRRGFEMDFAELLLEDYKASLKYLSDHP
Template Known Secondary structure 

TT



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   421........430.........440.........450..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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