Job Description P33195 Confidence 99.78% Date Thu Jan 5 11:51:15 GMT 2012 Rank 57 Aligned Residues 317 % Identity 15% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.												550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	.	.	.	.	.	.	.	.	.	.	.	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.									.	.	.	.
Template Conservation																																																				.	.	.	.									.	.	.	.
Template Sequence		P	A	X	G	A	E	E	L	A	A	V	K	T	V	L	D	S	G	W	I	T	T	G	P	K	N	Q	E	L	E	A	A	F	C	R	L	T	G	N	Q	Y	A	V	A	V	S	S	A	T	A	.	.	.	.	G	X	H	I	A	L	X	A	.	.	.	.	L	G	I	G	E	G	D	E	V	I	T	P	S	X
Template Known Secondary structure																			T			S	S	S																	S						S					.	.	.	.									.	.	.	.	T	T			T	T							S	S
Template Predicted Secondary structure																																																				.	.	.	.									.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.		.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	.	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G
Query Conservation																									.
Alig confidence																									.														.	.	.	.	.																			.
Template Conservation																																							.	.	.	.	.																			.
Template Sequence		T	W	V	S	T	L	N	X	I	V	L	L	G	A	N	P	V	X	V	D	V	D	R	D	T	L	X	V	T	P	E	H	I	E	A	A	I	.	.	.	.	.	T	P	Q	T	K	A	I	I	P	V	H	Y	A	G	A	P	A	D	.	L	D	A	I	Y	A	L	G	E	R	Y	G	I	P	V	I	E	D	A
Template Known Secondary structure		S											T	T								B		T	T	T			B										.	.	.	.	.		T	T							B		G	G	G					.												T			B
Template Predicted Secondary structure																																							.	.	.	.	.																			.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		683	.	.	.	.	.	.	690	.		.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.					.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure											.																																						.	.	.	.
Query SS confidence											.																																						.	.	.	.
Query Sequence		A	N	M	N	A	Q	V	G	I	.	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	.	.	.	.	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F
Query Conservation											.																																						.	.	.	.
Alig confidence											.																				.	.	.	.	.	.													.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		A	H	A	T	G	T	S	Y	K	G	R	H	I	G	A	R	G	T	A	I	F	S	F	H	A	I	K	N	I	.	.	.	.	.	.	T	C	A	E	G	G	I	V	V	T	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L	G	V	D	Q	A	E	V	L	A	P	G	Y	K	Y	N	L	P	D
Template Known Secondary structure		T	T		T	T				T	T			T	T	S	S	S								T	T	S	S	S	.	.	.	.	.	.		S	S	S							S												T	B	T	T									S	S				B
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.		.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	.	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R
Query Conservation																																																													.
Alig confidence												.	.	.	.	.	.	.	.																																										.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		L	N	A	A	I	A	L	A	Q	L	.	.	.	.	.	.	.	.	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q	P	L	S	L	P	S	W	E	H	I	H	A	W	H	L	F	I	I	R	V	D	E	A	R	C	G	I	T	R	D	A	L	X	A	S
Template Known Secondary structure												.	.	.	.	.	.	.	.		T																					T	S	S								S	S							S												S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		837	.	.	840	.	.	.	.	.	.	.	.	.	850	.																							.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	T	K	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I	A
Template Known Secondary structure					T	T	B			B						G	G	G	S							S	T	T											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions