Job Description P33195 Confidence 99.31% Date Thu Jan 5 11:51:15 GMT 2012 Rank 181 Aligned Residues 311 % Identity 16% Template d1m7ya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.60

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		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.							.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	.	.	.	.	.	.	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P
Query Conservation																													.	.	.	.	.	.
Alig confidence					.	.	.																						.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																																																.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	D	.	.	.	Y	H	G	L	P	A	F	K	K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	H	L	V	L	T	A	G	A	T	S	A	N	E	T	F	I	F	C	L	.	.	.	.	.	.	.	.	.	A	D	P	G	E	A	V	L	I	P	T	P	Y	Y	P	G	F	D
Template Known Secondary structure					.	.	.	T	T																	T	T	T	S	S				G	G	G																			.	.	.	.	.	.	.	.	.			T	T								S			T	T
Template Predicted Secondary structure					.	.	.																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		610	.	.	.	.	.		.	.	.	.	620	.	.	.	.	.	.	.	.			.	630	.	.	.	.	.	.	.	.	.	640	.	.				.	.	.	.	.	.	.	650	.	.	.	.	.		.	.	.	.	660				.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.														.	.															.	.	.														.						.	.	.
Query SS confidence								.														.	.															.	.	.														.						.	.	.
Query Sequence		A	S	A	H	M	A	.	G	M	Q	V	V	V	V	A	C	D	K	N	G	.	.	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	.	.	.	G	D	N	L	S	C	I	M	V	T	Y	P	S	.	T	H	G	V	Y	.	.	.	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y
Query Conservation								.														.	.															.	.	.														.						.	.	.
Alig confidence								.														.	.															.	.	.														.						.	.	.			.
Template Conservation																																																																	.
Template Sequence		R	D	L	K	W	R	T	G	V	E	I	V	P	I	H	C	T	S	S	N	G	F	Q	I	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	R	V	K	G	V	L	V	T	N	P	S	N	P	L	G	T	T	M	T	R	N	E	.	L	Y	L	L	L	S	F	V	E	D	K	G	I	H	L	I
Template Known Secondary structure				T	T	T	T	T											G	G	G	T	S																	T	T										S	S		T	T	T									.												T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		680	.	.	.	.	.																	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	G	A	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		S	D	E	I	Y	S	G	T	A	F	S	S	P	S	F	I	S	V	M	E	V	L	K	D	R	N	C	D	E	N	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S	K	D	L	G	L	P	.	.	.	.	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	V	A	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	G	G	G			S	S	S									T	T	T	T	T		S	S	S	S	S	G	G	G	G							S	S	S	S	S			G	.	.	.	.	G	G								S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.			.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	.	.	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P
Query Conservation																																	.	.
Alig confidence		.	.	.	.	.																											.	.																										.													.	.
Template Conservation		.	.	.	.	.																																																						.													.	.
Template Sequence		.	.	.	.	.	A	T	K	M	S	S	F	G	L	V	S	S	Q	T	Q	H	L	L	S	A	M	L	S	D	K	K	L	T	K	N	Y	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	L	Q	K	S	.	G	I	S	C	L	N	G	N	A	G	L	F	.	.	C	W	V	D	M	R	H
Template Known Secondary structure		.	.	.	.	.					G	G	G	S																																												T	T	.	T								S	S	S		.	.						G	G
Template Predicted Secondary structure		.	.	.	.	.																																																						.													.	.
Template SS confidence
							296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.
		822	.	.	.	.	.		.	.	830	.	.	.	.	.	.	.	.	.		840	.	.	.	.		.	.	.	.	.	850			.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure								.													.						.							.	.
Query SS confidence								.													.						.							.	.
Query Sequence		L	K	E	E	T	G	.	I	S	E	L	D	I	A	K	R	L	I	D	.	Y	G	F	H	A	.	P	T	M	S	F	P	.	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E
Query Conservation								.													.						.							.	.
Alig confidence								.													.						.							.	.											.
Template Conservation																																														.
Template Sequence		L	L	R	S	N	T	F	E	A	E	M	E	L	W	K	K	I	V	Y	E	V	H	L	N	I	S	P	G	S	S	C	H	C	T	E	P	G	W	F	R	V	C	F	A	.	N	L	P	E	R	T	L	D	L	A	M	Q	R	L	K	A	F	V	G	E
Template Known Secondary structure		G	S	S	S	S	S														T	S							G	G	G	G	T		S	S	T	T							S	.	S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions