Job Description P33195 Confidence 99.86% Date Thu Jan 5 11:51:15 GMT 2012 Rank 29 Aligned Residues 355 % Identity 19% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

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		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540						.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		M	H	S	L	E	R	K	D	L	A	L	N	Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	.	.	.	.	.	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C
Query Conservation																																																			.	.	.	.	.
Alig confidence																																						.	.												.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		V	F	A	A	I	E	Q	E	R	K	R	Q	H	A	K	I	E	L	I	A	S	E	N	F	V	S	R	A	V	M	E	A	Q	G	S	V	.	.	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	E	H	A	N
Template Known Secondary structure																S					T	T													T	S	G	.	.	G	G	G							T	T			S	S	S																							S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.						.	.	.	620	.	.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure																																																				.	.	.	.	.												.
Query SS confidence																																																				.	.	.	.	.												.
Query Sequence		M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	.	.	.	.	.	M	Q	V	V	V	V	A	C	D	K	N	.	G	N	I	D	L	T	D	L	R	A	K	A	E
Query Conservation																																																				.	.	.	.	.												.
Alig confidence																				.	.	.	.	.	.	.	.																									.	.	.	.	.												.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y	F	T	V	L	.	.	.	.	.	.	.	.	E	H	G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y	G	V	D	P	E	T	H	V	I	D	Y	D	D	V	R	E	K	A	R
Template Known Secondary structure					S	S														.	.	.	.	.	.	.	.		T	T								G	G	G	T			G	G	G	T		T	T	S						S							B		T	T	T		S	B
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.			.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	.	.	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G
Query Conservation																																																										.	.
Alig confidence		.	.	.																				.																																		.	.															.	.	.	.	.	.
Template Conservation		.	.	.																				.																																																		.	.	.	.	.	.
Template Sequence		.	.	.	L	H	R	P	K	L	I	V	A	A	A	S	A	Y	P	R	I	I	D	.	F	A	K	F	R	E	I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y	A	H	F	V	T	T	T	T	H	K	T	L	.	.	.	.	.	.	R	G
Template Known Secondary structure		.	.	.					S							S	S			S				.												T								T	T	T						T	T	S	S			S	T	T	T		S						S	S	S	T	T	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																				.																																																		.	.	.	.	.	.
Template SS confidence
					161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	G	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P	L	M	H	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q	N
Template Known Secondary structure			S																			T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	S	S																		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.													.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850								.	.	.	.	.	.	.	.	.	860	.					.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.												.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.												.	.	.	.
Query Sequence		A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	.	.	.	.	.	.	.	V	A	G	T	L	M	V	E	P	T	E	.	.	.	.	S	E	S	K	V	E
Query Conservation																																																						.	.	.	.	.	.	.												.	.	.	.
Alig confidence														.	.									.	.	.	.																											.	.	.	.	.	.	.												.	.	.	.
Template Conservation														.	.									.	.	.	.
Template Sequence		E	G	F	T	L	V	S	G	G	T	D	N	.	.	H	L	L	L	V	D	L	R	.	.	.	.	P	Q	Q	L	T	G	K	T	A	E	K	V	L	D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	P	F	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E
Template Known Secondary structure		T	T				G	G	G	S		S	S	.	.	S							G	.	.	.	.	G	G	T														T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure														.	.									.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		868	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	E	I	A	A	I	I	G	L	V	L	K	N	V	G	S
Template Known Secondary structure														T		T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions