Job Description P33195 Confidence 99.25% Date Thu Jan 5 11:51:15 GMT 2012 Rank 193 Aligned Residues 343 % Identity 16% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.								.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.							.	.	.	.	.	.	.	570
Predicted Secondary structure																	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Query Sequence		Q	A	M	I	P	L	G	S	C	T	M	K	L	N	A	.	.	.	.	.	.	.	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	.	.	.	.	.	.	D	A	V	C	M	Q	P	N
Query Conservation																	.	.	.	.	.	.	.																																													.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																					.	.	.																						.	.	.	.	.	.
Template Conservation																																												.	.	.
Template Sequence		N	G	V	I	Q	M	G	L	A	E	N	Q	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	.	.	.	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A	G	G
Template Known Secondary structure		T	S	B				S	S					S	S												T	T	S	S	T	T												.	.	.	T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.			.	630	.	.	.	.	.	.	.	.	.	640				.	.	.	.
Predicted Secondary structure																																																.													.	.													.	.	.
Query SS confidence																																																.													.	.													.	.	.
Query Sequence		S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	.	M	Q	V	V	V	V	A	C	D	K	N	G	.	.	N	I	D	L	T	D	L	R	A	K	A	E	.	.	.	Q	A	G	D
Query Conservation																																																.													.	.													.	.	.
Alig confidence								.								.	.	.	.	.	.	.	.																									.													.	.													.	.	.
Template Conservation								.								.	.	.	.	.	.	.	.
Template Sequence		A	T	G	A	N	E	.	T	I	I	F	C	L	A	.	.	.	.	.	.	.	.	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I
Template Known Secondary structure								.								.	.	.	.	.	.	.	.		T	T							S	S			T	T					T	T	T	T	T											T	T	T	T	T																	T	T
Template Predicted Secondary structure								.								.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.		.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.				.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.											.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700					.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence														.	.	.																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		N	L	S	C	I	M	V	T	Y	P	S	T	.	.	.	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	.	.	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	.	.	.	.	V	S	H	L	N	L	H
Query Conservation														.	.	.																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence														.	.	.																													.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		K	V	K	G	L	I	L	T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S
Template Known Secondary structure										S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S							S	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.			.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	.	.	A	E	G	L	K	K	A	S	Q	V	A
Query Conservation																																																																					.	.
Alig confidence								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	M	G	L	P	.	.	.	.	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	K	M	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L
Template Known Secondary structure		T	T	S	S		G	.	.	.	.	G	G								S								.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S														T	T
Template Predicted Secondary structure								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300															.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.		.	830	.	.	.	.	.	.	.	.		.	840	.	.	.	.		.	.	.	.	.	850			.	.	.	.	.	.	.	.	.	860
Predicted Secondary structure																																													.											.							.							.	.
Query SS confidence																																													.											.							.							.	.
Query Sequence		I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	.	S	E	L	D	I	A	K	R	L	I	.	D	Y	G	F	H	A	.	P	T	M	S	F	P	.	.	V	A	G	T	L	M	V	E	P	T
Query Conservation																																													.											.							.							.	.
Alig confidence															.														.	.															.											.							.							.	.
Template Conservation															.														.	.
Template Sequence		G	K	R	H	K	H	F	T	N	G	L	E	V	.	V	G	I	K	C	L	K	N	N	A	G	L	F	.	.	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	Q	E	P	G	W	F	R	V	C	F	A
Template Known Secondary structure															.	T	T			B				S	S	S	S		.	.						G	G	G		S	S	S	S														T	S							G	G	G	G	T		S	S	S	S							S
Template Predicted Secondary structure															.														.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		861	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R	F	V	G
Template Known Secondary structure		.	S	S
Template Predicted Secondary structure		.
Template SS confidence
			417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions