Return to main results Retrieve Phyre Job Id

Job DescriptionP33195
Confidence99.12%DateThu Jan 5 11:51:15 GMT 2012
Rank207Aligned Residues316
% Identity15%Templated1d2fa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   531........540.........550.........560... ......570.........580.........590.........600......
Predicted Secondary structure 










....


















Query SS confidence 
































. . . .










































Query Sequence  AELHPFCPPEQAEGYQQMIAQLADWLVKLTGYD. . . . AVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHG
Query Conservation     




 
 


 

 
 
 
  
 





.... 




 


 

 


  



  


   
  



 



Alig confidence 







...


.

















....


















.........














Template Conservation       
  ...   .  

 


               
  
 
 
  
       .........   

 

   
   
Template Sequence  HGVFGYSR. . . WKN. DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW. . . . . . . . . SETGEGVVIHTPAYD
Template Known Secondary structure  T






...S

.S




GGGS
S.........S
TT
S

Template Predicted Secondary structure 







...


.






.........







Template SS confidence 















































































   56...60... ... ...70.........80.........90.........100....... ..110.........120..
 
   607..610.........620........ .630.........640.........650.........660 .........670.........680
Predicted Secondary structure 












...












...



Query SS confidence 





















. . .































. . .



















Query Sequence  TNPASAHMAGMQVVVVACDKNG. . . NIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVY. . . EETIREVCEVVHQFGGQVYL
Query Conservation 





   
  

 
    

... 


  

         






 


 


...
  
 

 



  





Alig confidence 





















...












..
















...



















Template Conservation           
                            ..              
        
  
          

 
Template Sequence  AFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK. . PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVIS
Template Known Secondary structure  TT


SSS

TS..TTSS
TTT




TTTT
Template Predicted Secondary structure 
















..



















Template SS confidence 















































































   123......130.........140.........150.........160 .........170.........180.........190.........200
 
   681.. ......690.........700.........710.........720.........730.........740.........750.....
Predicted Secondary structure  .....












































Query SS confidence 


. . . . .







































































Query Sequence  DGA. . . . . NMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAA
Query Conservation 


.....
 


 

  


 













 







 
  


  


 



 

 
 
  
  
 

  
Alig confidence 


.....





























....


















...........







Template Conservation 
                            
 

     ....


 
              ...........        
Template Sequence  DEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIP. . . . ALTGAYGIIENSSSRDAYL. . . . . . . . . . . SALKGRDG
Template Known Secondary structure 
TTTT
B
SSS



GGGT

SS
ST
G....GG


S...........TTS
Template Predicted Secondary structure 





















....



...........


Template SS confidence 















































































   201........210.........220.........230........ .240.........250....... ..260.....
 
   756...760.........770.........780.........790.........800.........810.........820.........830.....
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  PFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAK
Query Conservation    
 
   
 
  

  

  


 


 
 





  

     
          



          

 
 



Alig confidence 

























































.





....










Template Conservation            
                                         
     .    
 ....           
Template Sequence  LSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYL. AWLDLR. . . . PLNIDDNALQK
Template Known Secondary structure 

S



SS





SB
S.
G....GG


Template Predicted Secondary structure 

















.

....




Template SS confidence 















































































   266...270.........280.........290.........300.........310.........320... ...... 330.........340
 
   836...840 .... ..... 850.........860.........870.........880...
Predicted Secondary structure 
.



.




..









Query SS confidence 




.



.




. .

































Query Sequence  RLIDY. GFHA. PTMSF. . PVAGTLMVEPTESESKVELDRFIDAMLAIRAEID
Query Conservation 

 
 .



.

   ..

   




















  
  
  
Alig confidence 




.



.




..










..




















Template Conservation   
    

 
 

  
       



  ..     
  

  
  

   
Template Sequence  ALIEQEKVAIMPGYTYGEEGRGFVRLNAG. . CPRSKLEKGVAGLINAIRAVR
Template Known Secondary structure  TT

GGGG
GGGTT

..S

Template Predicted Secondary structure 









..


Template SS confidence 



















































   341........350.........360......... 370.........380.........390
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions