Job Description P33195 Confidence 98.68% Date Thu Jan 5 11:51:15 GMT 2012 Rank 231 Aligned Residues 313 % Identity 10% Template c3t18D_ PDB info PDB header:transferase Chain: D: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase from anaerococcus prevotii dsm2 20548. Resolution 2.86 Å

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		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.			.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	A	V	C	.	.	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N
Query Conservation																																						.	.
Alig confidence										.	.	.																										.	.																			.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																														.	.	.	.	.	.	.	.
Template Sequence		S	H	I	A	S	Y	A	P	.	.	.	I	E	G	E	K	D	Y	R	K	I	V	I	D	T	L	F	G	P	Y	K	P	E	G	Y	I	S	A	I	A	T	P	G	G	T	G	A	I	R	S	A	I	F	S	Y	L	.	.	.	.	.	.	.	.	D	E	G	D	P	L	I	C	H	D	Y	Y	W	A	P	Y
Template Known Secondary structure		G	G	T	S	S				.	.	.	T	T															G	G	G			S	S								S													T	S	.	.	.	.	.	.	.	.		S	S							S	S			T
Template Predicted Secondary structure										.	.	.																																														.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.		.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.				.	.	.	.	.	.	.	650	.	.	.	.		.	.	.	.	.	660	.	.			.	.	.	.	.	.	.	670	.	.	.							.	.
Predicted Secondary structure																				.																	.	.	.													.									.	.												.	.	.	.	.	.
Query SS confidence																				.																	.	.	.													.									.	.												.	.	.	.	.	.
Query Sequence		P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	.	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	.	.	.	G	D	N	L	S	C	I	M	V	T	Y	P	.	S	T	H	G	V	Y	E	E	.	.	T	I	R	E	V	C	E	V	V	H	Q	.	.	.	.	.	.	F	G
Query Conservation																				.																	.	.	.													.									.	.												.	.	.	.	.	.
Alig confidence																				.																	.	.	.													.									.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	I	C	E	E	F	G	R	N	F	K	T	F	E	F	F	T	D	D	F	A	F	N	I	D	V	Y	K	E	A	I	D	E	G	I	R	D	S	D	R	I	A	S	L	I	N	S	P	G	N	N	P	T	G	Y	S	L	S	D	E	E	W	D	E	V	I	T	F	L	K	E	K	A	E	D	K	D	K	K
Template Known Secondary structure									T									B		S	S	S	S	B															S		S									S	S		T	T	T														T	T	T	T	T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		676	.	.	.	680	.	.	.	.											.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	V	Y	L	D	G	A	N	.	.	.	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																														.	.	.	.																			.	.
Template Conservation																																																		.	.	.	.																			.	.
Template Sequence		I	T	L	I	V	D	V	A	Y	L	E	F	A	G	D	G	D	Q	Q	R	K	F	F	E	K	F	S	N	L	P	R	N	L	F	V	V	V	A	F	S	X	S	K	S	H	T	A	Y	.	.	.	.	G	L	R	S	G	A	A	V	G	I	S	S	S	K	E	I	I	E	.	.	E	F	E	A	S	L	A	H
Template Known Secondary structure									T	T		T	T	S	S	S	S	S	S	S	S	T	T	T	G	G	G	S	S			T	T														T		G	.	.	.	.	G	G										S							.	.
Template Predicted Secondary structure																																																		.	.	.	.																			.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.
		746	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E
Query Conservation
Alig confidence																																																								.																			.	.	.	.	.	.	.
Template Conservation																																																								.																			.	.	.	.	.	.	.
Template Sequence		S	A	R	C	N	W	S	N	G	T	H	A	A	Q	N	I	L	I	E	L	E	R	A	E	N	K	K	I	Y	E	Q	E	L	V	D	L	R	N	X	L	K	S	R	A	D	V	F	V	T	A	A	K	E	N	.	K	L	T	X	I	P	Y	F	G	G	F	F	T	F	I	P	T	D	.	.	.	.	.	.	.
Template Known Secondary structure							T	S	S							T	T	T	S	S	T	T	S	G	G	G	T	T																												.	T								S	S	S							S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.																			.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L
Query Conservation
Alig confidence		.	.	.																		.	.	.	.												.
Template Conservation		.	.	.																		.	.	.	.												.
Template Sequence		.	.	.	K	A	F	D	I	V	K	D	L	E	K	E	N	I	F	T	I	.	.	.	.	P	S	A	K	G	I	R	V	A	I	C	.	G	V	G	E	E	K	I	P	K	L	V	Q	R	L	A
Template Known Secondary structure		.	.	.											T	T	T					.	.	.	.			S	S						S	T	.	T	S		T	T	T
Template Predicted Secondary structure		.	.	.																		.	.	.	.												.
Template SS confidence
					362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions