Job Description P33195 Confidence 99.12% Date Thu Jan 5 11:51:15 GMT 2012 Rank 209 Aligned Residues 335 % Identity 11% Template c3rq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase class i and ii from veillonella2 parvula Resolution 2.20 Å

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		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.			.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		A	A	A	E	M	I	P	I	T	W	P	E	F	A	E	L	H	P	F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	Y	D	.	.	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R
Query Conservation																																																.	.
Alig confidence														.									.	.	.																							.	.																						.	.	.	.	.	.	.	.
Template Conservation														.									.	.	.																																														.	.	.	.	.	.	.	.
Template Sequence		K	T	V	K	E	E	Y	L	S	L	S	D	.	S	E	H	V	G	Y	A	P	.	.	.	I	A	G	I	P	D	F	L	C	A	A	E	K	E	C	F	G	N	F	R	P	E	G	H	I	R	S	I	A	T	A	G	G	T	G	G	I	H	H	L	I	H	N	Y	T	.	.	.	.	.	.	.	.	E	P	G
Template Known Secondary structure										T				.					S				.	.	.	T	T															G	G	G			S	S								S														S	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure														.									.	.	.																																														.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.		.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.			.	.	.	.	.	.	.	650	.	.	.	.			.	.	.	.	.	660			.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																			.	.													.	.							.	.
Query SS confidence																															.																			.	.													.	.							.	.
Query Sequence		D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	.	D	K	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	.	.	G	D	N	L	S	C	I	M	V	T	Y	P	.	.	S	T	H	G	V	Y	.	.	E	E	T	I	R	E	V	C
Query Conservation																															.																			.	.													.	.							.	.
Alig confidence																															.																			.	.													.	.							.	.
Template Conservation
Template Sequence		D	E	V	L	T	A	D	W	Y	W	G	A	Y	R	V	I	C	S	D	T	G	R	T	L	V	T	Y	S	L	F	D	E	H	N	N	F	N	H	E	A	F	Q	N	R	V	N	E	L	A	A	K	Q	T	N	V	V	V	I	F	N	T	P	G	N	N	P	T	G	Y	S	I	E	D	K	D	W	D	S	I	L
Template Known Secondary structure								S	S			T									T	T								S	B		T	T	S	S	B																	S									S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		669	670	.							.	.	.	.	.	.	.	.	680	.	.	.	.											.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	V	.	.	.	.	.	.	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	.	.	.	.	.	.	.	.	.	.	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P
Query Conservation					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		N	F	L	K	D	L	V	A	I	G	R	N	N	V	I	I	G	I	D	V	A	Y	L	D	Y	S	G	E	K	D	E	V	R	A	F	F	N	K	F	S	H	L	P	K	E	I	L	T	C	V	C	Y	S	L	S	K	G	F	T	X	Y	.	.	.	.	G	Q	R	V	G	A	X	I	G	I	S	D	D	E	E
Template Known Secondary structure										T	S	S										T	T	G	G	G	S	S							G	G	G	G	G	G	T	T			T	T									S	T	T	T	T	T			.	.	.	.	S	S										S	S
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A
Query Conservation
Alig confidence																																														.																																			.
Template Conservation																																														.																																			.
Template Sequence		I	A	D	E	F	F	E	V	N	K	S	T	S	R	A	T	W	S	N	I	C	R	P	A	X	R	T	X	A	N	I	V	A	D	P	A	K	F	K	E	Y	E	A	E	.	R	N	C	Y	Y	Q	L	I	R	D	R	A	D	I	F	K	Q	E	A	A	Q	V	G	L	P	X	L	P	Y	R	G	G	F	F	.
Template Known Secondary structure																		T	S	S														T												.																							T								S	S	S		.
Template Predicted Secondary structure																																														.																																			.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D	Q	V
Query Conservation
Alig confidence		.	.							.	.	.	.	.	.	.	.																		.	.	.	.												.
Template Conservation		.	.							.	.	.	.	.	.	.	.																		.	.	.	.												.
Template Sequence		.	.	I	T	I	P	T	D	.	.	.	.	.	.	.	.	S	A	N	A	I	C	E	E	L	K	K	E	H	I	Y	V	I	.	.	.	.	A	L	A	N	G	I	R	I	A	A	C	.	G	I	P	K	C	Q	X	T	G	L	A	E	K	I	Y	N	A	X	K	S	L	G	K	L
Template Known Secondary structure		.	.						T	.	.	.	.	.	.	.	.	T											T	T					.	.	.	.			S	S						G	G	.	G	S						T	T												T	T
Template Predicted Secondary structure		.	.							.	.	.	.	.	.	.	.																		.	.	.	.												.
Template SS confidence
				358	.	360	.	.	.									.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380					.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions