Job Description P33195 Confidence 99.37% Date Thu Jan 5 11:51:15 GMT 2012 Rank 169 Aligned Residues 299 % Identity 12% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		551	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		Q	L	A	D	W	L	V	K	L	.	T	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N
Query Conservation											.
Alig confidence											.																											.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		A	F	K	K	S	V	S	Q	L	Y	T	G	V	K	P	E	Q	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	I	.	.	.	.	.	.	.	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K	S	L	G	A	E	V	D	L	W	Q	I	E	E	E	N	G
Template Known Secondary structure									T	T	S	S	S			G	G	G					S															.	.	.	.	.	.	.		T	T								S	S		T									T	T										G	G	G	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.			.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.		.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure																																				.	.																							.
Query SS confidence																																				.	.																							.
Query Sequence		I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	T	H	G	V	Y	E	E	T	.	.	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L	D	G	A	N	M	.	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L
Query Conservation																																				.	.																							.
Alig confidence																																				.	.																							.
Template Conservation
Template Sequence		W	L	P	D	L	E	K	L	R	Q	L	I	R	P	T	T	K	X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D	V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S
Template Known Secondary structure		T													T	T								S	S		T	T	T																		T	T	T									S				S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I
Query Conservation
Alig confidence									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	T	Y	S	L	P	.	.	.	.	G	I	R	I	G	W	V	A	A	N	H	Q	V	T	D	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	Y	R	D	Y	T	X	I	C	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E
Template Known Secondary structure						S		G	.	.	.	.	G	G																.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	G	G	G	T	T	S																T
Template Predicted Secondary structure									.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.															.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.		.	840	.	.	.	.		.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure																																																						.							.
Query SS confidence																																																						.							.
Query Sequence		L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I	A	K	R	L	I	.	D	Y	G	F	H	A	.	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S
Query Conservation																																																						.							.
Alig confidence																												.	.							.	.	.	.	.														.							.																	.	.
Template Conservation																												.	.							.	.	.	.	.																																						.	.
Template Sequence		E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	V	S	T	.	.	S	F	V	K	I	A	.	.	.	.	.	V	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	E	R	D	G	Y	V	R	L	G	F	A	.	.	C	E
Template Known Secondary structure															T	T							S	S	S	S		.	.							.	.	.	.	.		S	S																				G	G	G	G	T		T	T								.	.	S
Template Predicted Secondary structure																												.	.							.	.	.	.	.																																						.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	T	L	I	K	G	L	E	K	L	S	Q	F	L	R	R	F	D
Template Known Secondary structure																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions