Job Description P33195 Confidence 99.23% Date Thu Jan 5 11:51:15 GMT 2012 Rank 199 Aligned Residues 298 % Identity 14% Template c3oksB_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-aminobutyrate transaminase; PDBTitle: crystal structure of 4-aminobutyrate transaminase from mycobacterium2 smegmatis Resolution 1.80 Å

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		551	.	.	.	.	.	.	.	.	560				.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																																											.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																																											.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	A	D	W	L	V	K	L	T	.	.	.	G	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A	S	A	H	M	A	G	M	Q	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.																																																											.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																	.											.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																															.											.	.	.	.	.
Template Sequence		A	V	C	E	Q	L	N	R	L	T	P	V	R	G	D	K	R	S	A	L	F	N	S	G	S	E	A	V	E	.	N	A	V	K	I	A	R	S	H	T	.	.	.	.	.	H	K	P	A	V	V	A	F	D	H	A	Y	H	G	R	T	N	L	T	M	A	L	T	A	K	V	M	P	Y	K	D	G	F	G	P
Template Known Secondary structure											S	S			S	S							S	S							.											.	.	.	.	.									T	T					S	S											T	T	T	T	T	T			S
Template Predicted Secondary structure																															.											.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
						619	620	.	.	.	.	.	.														.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.			.	.	.	.	.	.	.	650	.	.	.		.	.	.	.	.	.	660	.	.				.	.	.	.	.	.	.	670	.	.	.	.	.
Predicted Secondary structure		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.										.	.	.
Query SS confidence		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.										.	.	.
Query Sequence		.	.	.	.	V	V	V	V	A	C	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	N	I	D	L	T	D	L	R	A	K	A	E	Q	A	.	.	G	D	N	L	S	C	I	M	V	T	Y	.	P	S	T	H	G	V	Y	E	E	.	.	.	T	I	R	E	V	C	E	V	V	H	Q	F	G
Query Conservation		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.										.	.	.
Alig confidence		.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.										.	.	.
Template Conservation
Template Sequence		F	A	P	E	I	Y	R	A	P	L	S	Y	P	F	R	D	A	E	F	G	K	E	L	A	T	D	G	E	L	A	A	K	R	A	I	T	V	I	D	K	Q	I	G	A	D	N	L	A	A	V	V	I	E	P	I	Q	G	E	G	G	F	I	V	P	A	D	G	F	L	P	T	L	L	D	W	C	R	K	N	D
Template Known Secondary structure				S	S													G	G	G						T																	T		G	G	G								S	S	B	T	T	T	T		B				T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.									700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		G	Q	V	Y	L	D	G	A	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	.	.	.	.	.	.	.	.	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.												.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.																										.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	F	I	A	D	E	V	Q	.	.	.	.	T	G	F	A	R	T	G	A	M	F	A	C	E	H	E	G	I	D	P	D	L	I	V	T	A	.	.	.	.	.	.	.	.	G	I	A	G	G	L	P	L	S	A	V	T	G	R	A	E	I	M	D	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	.	.	.	.	T	T	T	T	T	T	S	S	S	S	G	G	G	T	T	T				S						.	.	.	.	.	.	.	.		T	T	T	T	S	S												T		S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.																										.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.									.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	G	A	V	S	A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	S	G	L	G	G	T	Y	G	G	N	P	I	A	C	A	A	A	L	A	T	I	E	T	I	E	S	E	G	L	V	A	R	A	Q	Q	I	E	K	I	M	K	D	R	L	G	R	L	Q	A	E	D	D	R	I	G	D	V	R	G	R	G	A	M	I	A	M	E	L	V	K	A	G	T	T	E	P	D	A
Template Known Secondary structure			T	T	S	S			S	S	S	S																		T	T																								T	T								T	T							B	S	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	E	L	D	I	A	K	R	L	I	D	Y	G	F	H	A	P	T	M	S	F	P	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		D	L	T	K	A	L	C	A	G	A	H	A	A	G	V	I	V	L	S	C	G	.	T	Y	G	N	V	V	R	F	L	P	P	L	S	I	G	D	D	L	L	N	E	G	L	D	V	L	E	E	V	L	R
Template Known Secondary structure														T	T								.	T	T	S									T	T
Template Predicted Secondary structure																							.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions