Job Description P33195 Confidence 99.20% Date Thu Jan 5 11:51:15 GMT 2012 Rank 202 Aligned Residues 305 % Identity 15% Template c3nraA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate aminotransferase (yp_354942.1) from2 rhodobacter sphaeroides 2.4.1 at 2.15 a resolution Resolution 2.15 Å

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		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.						.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		F	C	P	P	E	Q	A	E	G	Y	Q	Q	M	I	A	Q	L	A	D	W	L	V	K	L	T	G	.	.	.	.	.	Y	D	A	V	C	M	Q	P	N	S	G	A	Q	G	E	Y	A	G	L	L	A	I	R	H	Y	H	E	S	R	N	E	G	H	R	D	I	C	L	I	P	A	S	A	H	G	T	N	P	A
Query Conservation																												.	.	.	.	.
Alig confidence					.	.	.																					.	.	.	.	.																.								.	.	.	.	.	.	.	.
Template Conservation					.	.	.																																									.								.	.	.	.	.	.	.	.
Template Sequence		Y	T	E	.	.	.	Y	R	G	D	L	G	I	R	D	L	L	A	P	R	L	A	A	F	T	G	A	P	V	D	A	R	D	G	L	I	I	T	P	G	T	Q	G	A	L	F	.	L	A	V	A	A	T	V	.	.	.	.	.	.	.	.	A	R	G	D	K	V	A	I	V	Q	P	D	Y	F	A	N	R	K
Template Known Secondary structure		S			.	.	.	T	T																		T	S				T	T	T	S					S								.					T	T		.	.	.	.	.	.	.	.		T	T								S			T
Template Predicted Secondary structure					.	.	.																																									.								.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.							630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.					.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
Predicted Secondary structure																					.	.	.	.	.	.																											.	.	.	.
Query SS confidence																					.	.	.	.	.	.																											.	.	.	.
Query Sequence		S	A	H	M	A	G	M	Q	V	V	V	V	A	C	D	K	N	G	N	.	.	.	.	.	.	I	D	L	T	D	L	R	A	K	A	E	Q	A	G	D	N	L	S	C	I	M	V	T	Y	P	S	.	.	.	.	T	H	G	V	Y	E	E	T	I	R	E	V	C	E	V	V	H	Q	F	G	G	Q	V	Y	L
Query Conservation																					.	.	.	.	.	.																											.	.	.	.
Alig confidence																					.	.	.	.	.	.												.	.	.													.	.	.	.								.
Template Conservation																																						.	.	.																								.
Template Sequence		L	V	E	F	F	E	G	E	X	V	P	V	Q	L	D	Y	V	S	A	D	E	T	R	A	G	L	D	L	T	G	L	E	E	A	F	K	.	.	.	A	G	A	R	V	F	L	F	S	N	P	N	N	P	A	G	V	V	Y	S	A	E	E	.	I	G	Q	I	A	A	L	A	A	R	Y	G	A	T	V	I	A
Template Known Secondary structure						T	T								B				S	S			S	S			B											.	.	.	T	T								S	S		T	T	T									.												T
Template Predicted Secondary structure																																						.	.	.																								.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		681	.	.								.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		D	G	A	.	.	.	.	.	.	.	N	M	N	A	Q	V	G	I	T	S	P	G	F	I	G	A	D	V	S	H	L	N	L	H	K	T	F	C	I	P	H	G	G	G	G	P	G	M	G	P	I	G	V	K	A	H	L	A	P	F	V	P	G	H	S	V	V	Q	I	E	G	M	L	T	R	Q	G	A	V	S
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																															.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	L	Y	S	R	L	R	Y	A	G	A	S	Y	T	H	L	R	A	E	A	A	V	D	A	E	N	V	V	T	I	X	G	P	S	T	E	S	L	S	.	.	.	.	G	Y	R	L	G	V	A	F	G	S	R	A	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	X	E	K	L	Q	A
Template Known Secondary structure				T	T	T	T	S	B		T	T						G	G	G		T	T	S		G	G	G													G	.	.	.	.	G	G													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270															.	.	.	.	.	.	.	.
		754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	P	F	G	S	A	S	I	L	P	I	S	W	M	Y	I	R	M	M	G	A	E	G	L	K	K	A	S	Q	V	A	I	L	N	A	N	Y	I	A	S	R	L	Q	D	A	F	P	V	L	Y	T	G	R	D	G	R	V	A	H	E	C	I	L	D	I	R	P	L	K	E	E	T	G	I	S	E	L	D	I
Query Conservation
Alig confidence																																																												.	.	.							.	.	.	.
Template Conservation																																																												.	.	.							.	.	.	.
Template Sequence		I	V	S	L	R	A	A	G	Y	S	Q	A	V	L	R	G	W	F	D	E	A	P	G	W	X	E	D	R	I	A	R	H	Q	A	I	R	D	E	L	L	H	V	L	R	G	E	G	V	F	A	R	T	P	Q	A	G	S	Y	.	.	.	L	F	P	R	L	P	.	.	.	.	K	L	A	V	A	P	A	E	F
Template Known Secondary structure				T	S	S	S						G	G	G	G	G	T	T				T	T																										B					S	B	S	S		.	.	.				B			.	.	.	.		B	S	S
Template Predicted Secondary structure																																																												.	.	.							.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.					.	.	.	.	.	.	350	.	.
		834	.	.	.	.	.		840	.	.	.	.		.	.	.	.	.	850			.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.
Predicted Secondary structure								.						.							.	.
Query SS confidence								.						.							.	.
Query Sequence		A	K	R	L	I	D	.	Y	G	F	H	A	.	P	T	M	S	F	P	.	.	V	A	G	T	L	M	V	E	P	T	E	S	E	S	K	V	E	L	D	R	F	I	D	A	M	L	A	I	R	A	E	I	D
Query Conservation								.						.							.	.
Alig confidence								.						.							.	.											.	.
Template Conservation																																	.	.
Template Sequence		V	K	I	L	R	L	Q	A	G	V	V	V	T	P	G	T	E	F	S	P	H	T	A	D	S	V	R	L	N	F	S	.	.	Q	D	H	E	A	A	V	A	A	A	R	R	I	V	T	L	V	E	R	Y	R
Template Known Secondary structure																G	G	G	T		T	T		T	T	B							.	.	S																				B
Template Predicted Secondary structure																																	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.			.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions